Solanum dulcamara (climbing nightshade): 129886446
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Entry
129886446 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129886446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129886446
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129886446
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
129886446
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
PHD_4
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
129886446
NCBI-ProteinID:
XP_055817115
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Position
4:14144596..14148501
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AA seq
332 aa
AA seq
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MEFDSIECVSSSDGIEEDEIPQIHPHIIRSQFSSSKTTTHKNNSSNILCGGNNGGIAIHP
ATSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARVHNRCPTCRQELGDIRCLALEKV
AESLELPCKFGSLGCPEIFPYYSKLKHEAACNFRPYNCPYAGSECAAVGDIPYLVTHLRD
DHMVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFL
RFMGDETDAQNYTYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLVIQRNMALFFSG
GDRKELKLRVTGRIWKEQQNPDEGACIPNLCS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatagcattgaatgtgtatcatcttctgatggtattgaggaagatgagatt
ccacaaattcatccacacatcattcgttctcagttttcgtcctcaaagacgacgacccac
aagaacaacagcagcaacatcttatgtggtggaaataatgggggaattgcaattcatccg
gcgactagcgttcatgagcttcttgaatgtcctgtttgtaccaattctatgtaccctcca
attcatcagtgtcataatgggcacactatctgttcaacatgtaaagccagggtacacaac
cgatgtcccacttgtagacaggagcttggtgatatcagatgtttagcattggaaaaggtg
gctgaatcacttgagctaccttgcaaatttggctctcttggatgtcctgagatatttcct
tattacagtaagctgaaacatgaggcagcctgtaattttagaccatacaactgcccgtat
gctgggtcagagtgtgcagctgttggtgatattccttatttggttactcatttgagagat
gatcacatggtagacatgcactctggatgcacttttaaccatcgctatgtcaaatctaat
cctcgagaagtggaaaatgctacgtggatgttaacagtgttcaattgttttggtcagtac
ttctgtctccatttcgaagcatttcagcttggaatggctcctgtttacatggcgttcctt
cggtttatgggagacgagacagatgcacaaaactacacctatagcctggaagttggggga
aacggaaggaagcttatctgggaaggtacacctcgaagcataagagacagtcataggaaa
gttagggatagccatgatggtctcgttatacaacgtaacatggcccttttcttctccgga
ggggacagaaaagagctcaagctacgggtgactggaagaatatggaaggaacaacagaat
ccagacgaaggagcatgcataccaaacctctgtagttaa
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