Solanum dulcamara (climbing nightshade): 129886554
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Entry
129886554 CDS
T09577
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129886554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129886554
03036 Chromosome and associated proteins [BR:
sdul03036
]
129886554
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129886554
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129886554
Chromatin remodeling factors
BAF complex
129886554
PBAF complex
129886554
GBAF(ncBAF) complex
129886554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
Bromodomain
AAA_14
HSA
Motif
Other DBs
NCBI-GeneID:
129886554
NCBI-ProteinID:
XP_055817253
LinkDB
All DBs
Position
4:complement(15326531..15339424)
Genome browser
AA seq
2235 aa
AA seq
DB search
MQSGGGAQQGGVAGAGGHGRNTAASASASPSSSSSASHMGLDQQKLHQQHQRQSLQQQFL
RRPEGNEAILAFQTGSPHGILGGGNFVGPSGSMQLPQQSRRYIEQHGSPTIREDGQNRSQ
GFEQQMLNPVQQAYLQYAYQAAQQKSALGMQHQQQMKMGMFGPSAKDQDPRIANMKMQEL
VAMQAANQAQASSSKISSEQHFSRSEKQSDQGQQLMTDQRPDPKLPSQPTLLGQTVATKP
MQAPPSQQSMANMTSNSLSMAAQMQAMQALAYERNLDLSLPANANIMAQLIPIMQSRMIA
QQKVPENNVHVQSSSGHMPKQQVSSPQVANDSSPHAHSSSDLSGSSSAKTRQAVTTGPLA
ASHSVASINNPNNIPQQQFSAHGRENNLPPRQPIMVSSGLPPMHYPQSSVNPNQGVDNTS
LPKPSSNSQETLQTQYARQLSRPSPHSAASSPDGNLGNSLMFQGGNVRQVQPQHLGFSRQ
QLHVLKAQILAFRRIKKGDGTLPRELLQAIIPPPLDVQMQQTFPPGGTVNQEKPSGKGSE
DNRRPTEPSEKGPQLVVPSNGLNGSEEEVTREENTAAATAPVPGSTTETKETASVVLPGK
EEQRIMVHASKSDQDADRAIQNIPSRGDIAPDRGKTVASQVTGSDTTQAKKPMQSSATQQ
KDTGPARKYHGPLFDFPSFTRKHDGFGPSMMMNNNNNLTLGYDIKDLLMEEGSEIHKRKR
EESIKKIGDILAINLERKRIRPDLVLRLQIEEKKLRLAGVQARMRDEIDQQQQEIMAMPD
RHYRKFVRLCERQRQDLSRQVQASQRANREKQLKSIFQWRKKFLESHWAIRDARTARNRG
VAKYHERMLREFSKKKDDNRNERMEALKNNDVERYREMLLEQQTNVPGDGAERYAVLSSF
LSQTEEYLHKLGGKITATKKQQEVDEAANAAAVAARAQGLSEEEVRAAAACAREEVMIRN
RFSEMNAPRDGSSVNKYYHLAHAVNERVIKQPSMLRAGTLRDYQLVGLQWMLSLYNNKLN
GILADEMGLGKTVQVMALIAYLMEFKQNYGPHLIIVPNAVLVNWKSEFLNWLPSASCIFY
VGGKDQRSKLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVL
ARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEGPTH
NADDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLRCRMSGFQSAVYD
WIKSTGTLRVDPEDEKRRAEKNPNYQPKTYKVLNNRCMELRKTCNHPLLNYPYLNVTKDF
LVKSCGKLWVLDRILIKLQRTGHRVLLFSTMTKLLDILEEHLQWRRLVYRRIDGTTSLED
RESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKNEEQAVARAHRIG
QKREVKVIYMEAVVDKIASHQKEDEYRGGVVDSDDDLAGKDRYMGSIESLIRNNIQQYKI
DMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETLHDVPSLQEVNRMIARSEEEIE
QFDQMDEECDWEEEMTRYDQVPKWLRATSKDVNTAIANLAKKPSKNVLFSSGVGVDSSGL
APESEKRRGRPKGKKVPIYTELDDDNGEFSEASSGERNGYSAHEEGEIGEFEDDEFSGAV
GATPVNKDQSEEDGPPFADRYEYHQGPLGAIKTRVPEQVGSSGSSSDNQRPTQIVSSSVS
SQQKFGSLSALDARPSSRAKRMADELEEGEIAVSGDSHVDLQQSGSWIQDRDEGEEEQVL
QPKIKRKRSLRVRPRHAAERPEETLIEKPAVHRGDSSQMAFQGDRRYDLQLRNDRGHKVH
ADPSGPKNSQNDASFKSKRSIPSRKSSSNSVKMHGSGKPDKVSRLSPDDGFEPTRESWDN
KLMNASGTYSGGTKMSEVIQRKCKTVITKLQKKIEKGGHQIIPLLHGLWKRIGSSGCMGG
SEDSPFGLQTIDLRVDESEYSGVLEFVSDVQLMLKRAVQYFGFSHEVRSEARKVHDLFFD
ILKIEFPETDFREARNSISFAGPAASTTPGASSRLMTVGQNKRHKLINEMEPDSSPLLKP
QTRGTLHAGEDAKSKSHVAQRETRFGGSSSRELSQKDDSRPFTHPGELVICKKKRKDREK
LGLKPGSSSAGPVSPPGVSCSIRSPGSLPTAKEGGRLNQQPPQQLNGSGSSSSVGWANPV
KRLRSDSSRRRQSHL
NT seq
6708 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgggggtggagctcagcaaggtggtgtcgccggagccggtggacatggccgg
aacacggcggcatcagcctcagcttctccttcatcatcttcttctgcctctcatatgggg
ttggatcagcagaagctgcatcaacaacaccaacggcagtcattacaacaacagttcctt
agaaggcctgaaggaaacgaagctattctggccttccagactggcagtccccatggaatt
ttaggtgggggtaattttgttggaccttctggatccatgcagttgcctcaacagtcgagg
aggtatattgaacagcatggttctcccaccattcgagaggatggacagaacaggagccag
ggctttgagcaacagatgttgaatcctgtccaacaggcatacctgcagtacgcttaccag
gcagcgcaacagaagtcagctcttgggatgcaacatcagcagcaaatgaaaatgggaatg
tttggcccttctgcgaaggaccaagatcctagaattgctaatatgaaaatgcaggaactt
gttgccatgcaggcagcgaaccaggcccaagcatcatcatcaaagatatcctcagagcaa
catttctctcgtagtgagaaacaatcagaccaggggcagcagttgatgaccgatcagaga
ccagacccaaagcttccttcccagccaacattgcttggccaaacggtagctacgaagccc
atgcaggctccaccatctcaacaaagcatggcgaacatgacgagtaactctctttctatg
gctgcacagatgcaagcaatgcaggctctggcttatgaacgtaatcttgatctgtcacta
cccgcaaatgctaacattatggcacagctaattccgatcatgcagtccagaatgattgcc
cagcagaaagtgcctgaaaacaatgtgcatgttcaatcgtcatcaggtcatatgccaaag
cagcaagtttcatcacctcaagttgcaaatgacagttcgccccatgctcattcttcaagt
gatttgtcggggtcaagttctgctaaaacaaggcaggctgttacaaccggtcctctcgct
gcgtctcatagcgtagcttcaattaataacccaaataatattcctcagcagcagttttct
gctcatggcagagagaacaatttgcctcctagacaaccaattatggttagcagtggatta
cctcctatgcattacccccagtcatctgtaaacccaaaccagggtgtggataacacctcg
ctgcctaaaccctcctcaaattcccaagaaaccttgcagacgcagtatgccaggcagttg
agtcgaccttcaccacattctgcagcttcttctccagatgggaacttggggaattccctt
atgtttcaaggtggaaatgtccgtcaggtgcaaccacaacatctggggttcagtaggcag
caacttcatgttcttaaagcccaaatacttgcatttagacgtataaagaaaggagatggg
acattaccacgtgaattactccaagctattattccgccacctctggacgtgcaaatgcag
caaacatttcctcctggtggtacagtaaatcaggagaaaccatcaggaaaaggttcagaa
gataacagaagacccacggaaccaagtgagaagggtcctcagcttgtagtaccatctaat
ggactgaatggttcagaggaggaggtcacaagagaggagaacacagctgccgcaaccgca
cctgtgccaggtagcacaactgagacaaaggagactgcatcagtggttcttcctggaaaa
gaggagcagcgaatcatggtacatgctagtaaatctgaccaggatgctgatcgtgctatt
cagaatattcctagcagaggtgatattgcaccagataggggtaaaactgttgcatcacaa
gttactggttctgatactactcaggcgaaaaaacctatgcagtctagtgctactcaacaa
aaagatacaggcccagctcggaagtatcatggaccattatttgattttccttccttcact
cgaaagcatgatggttttggaccatccatgatgatgaacaacaacaataatttaacattg
ggttatgatatcaaggatcttctaatggaggaaggctcagaaattcacaagagaaaaagg
gaggaaagtataaagaagattggtgatatactagctattaatttagagaggaaaaggatt
agaccagatcttgttctaagattgcaaatagaagaaaagaaactccgacttgctggtgta
caggcacgcatgagggatgagattgaccaacagcagcaggaaataatggcaatgcctgat
aggcattaccgaaaatttgtaaggctatgcgagcgtcaacgtcaggatctatctaggcaa
gtgcaggcctcccagagagctaacagagaaaaacaattaaaatctatttttcaatggcgt
aagaagtttcttgagtctcactgggcaatacgtgatgctcgaactgcacgcaacagggga
gtagctaagtatcatgagaggatgttgagggagttctcaaagaaaaaggatgataaccgg
aatgaaagaatggaggcgttgaagaataatgatgttgagagatacagggagatgttgcta
gagcagcagaccaacgtccctggtgatggtgctgagagatatgctgttctttcatcattt
ttgagtcagacagaagagtatcttcataaattgggaggtaaaattacagcgacaaaaaaa
caacaggaggttgacgaggctgcaaatgctgctgcagttgctgcacgtgcacagggccta
tctgaagaagaagtaagagctgcagcagcctgtgctcgggaggaagtcatgataaggaat
cgtttctctgaaatgaatgcacccagagatggttcatcagttaacaagtattatcatcta
gcccatgctgtgaatgaaagggttatcaagcagccttccatgttaagagctggaactttg
cgagactatcagcttgttgggttgcagtggatgctttctttgtataataataagctaaat
ggtatattggctgatgagatgggtctagggaagactgtgcaggttatggcattaattgct
tacttgatggaattcaaacaaaactatggaccacatcttataattgtgccaaatgcagtt
ctagttaattggaagagtgagtttctcaattggcttccatctgcgtcctgcattttctat
gttggtggaaaggatcaaagatcgaagttattttcgcaggaagttttagcgatgaagttt
aatgttctcgtgactacgtacgagttcatcatgtacgatcgttctaaactttcaaaagtc
gactggaagtatataataattgatgaagctcaacgtatgaaggatagagaatctgttctt
gctcgtgatcttgaccgatatcgatgccaaaggcgcttgcttctcacagggacaccattg
cagaatgatctgaaggaattatggtcacttctaaatctactacttccagaagtatttgat
aatcgcaaagcatttcatgattggttctctaagccctttcagaaagaaggtccgactcac
aatgctgatgatgactggcttgagactgagaagaaggtcattgttatccatcgacttcac
caaattcttgagcctttcatgctcaggcgtcgggttgaagatgttgaaggttcacttccg
cccaaggtctcagttgtcttaaggtgcagaatgtcaggttttcagagcgctgtttatgat
tggatcaagtctactggtacacttagagttgaccctgaagatgagaagcgaagggctgaa
aaaaatccaaattaccagcctaaaacatacaaagttttaaataataggtgtatggaactt
cggaaaacttgcaaccatcctttgcttaactatccatatctcaatgttacaaaggacttc
cttgttaaatcatgtgggaaattgtgggttcttgatcggatattaattaaacttcaaaga
acagggcacagggtgcttctttttagtaccatgacaaagctgcttgatatcttggaggag
catttgcagtggcgacgactcgtctatagaagaattgacgggacaacaagcttagaggac
cgtgaatcagctattgtggattttaatagtccagatactgattgctttatcttcttgcta
agcattcgtgctgctgggcgtggattaaatctgcaaactgctgacactgtcatcatctat
gatcctgatccaaaccccaaaaatgaggaacaggcagttgcaagagcccatcgtattggg
cagaagagagaagttaaagtcatttatatggaggcagttgttgacaaaattgcaagtcat
cagaaagaggatgaataccgtggaggcgtagttgattctgatgatgacctcgcaggcaag
gaccgctatatgggctctattgagagtctcattcggaataacattcaacagtataagatt
gacatggctgatgaagttataaatgctgggcgttttgatcaaaggactacacatgaagag
cgacgtttgactttagagacgttattacatgatgaggagagatatcaggagacacttcat
gatgttccctctcttcaggaggtaaatcgcatgattgctaggagtgaagaagagatagaa
caatttgatcaaatggatgaagaatgtgattgggaagaggagatgacaagatatgaccag
gttccgaagtggcttcgtgctaccagtaaggatgttaatacggccattgccaatttagca
aaaaagccctcaaagaatgtcttattcagtagtggtgttggtgtggactccagtggatta
gctcctgaatctgagaagagaagggggcggcccaaaggtaagaaggttcctatttacaca
gaattggacgacgacaatggagagttctctgaagcaagttctggggagaggaatggatat
tcagcccatgaagaaggtgaaattggggaattcgaagatgatgaatttagtggtgcagtt
ggcgctacaccagttaacaaagaccagtcagaagaagatggtcccccttttgctgataga
tatgaataccaccaaggtccactaggtgctataaagacacgtgtacctgaacaagtgggt
tcatcaggatcatcttcagacaaccaaaggccgacacaaatagtatcatcgtctgtgtca
tctcagcagaagtttggatccctttctgcattagatgccaggcccagttctcgggccaaa
aggatggcagatgaattagaggaaggagaaattgcagtatctggagactcacatgtggat
ctccagcaatctggtagttggatccaagatcgtgatgaaggtgaagaagaacaggtgttg
cagcccaaaataaaaaggaaacgcagtttgagggttcgaccaaggcatgctgcagaaagg
ccagaagagacactcattgagaagccagctgtgcatcgtggagattcttctcagatggca
tttcaaggggatcgtagatatgatcttcaattgagaaatgatcgtggacacaaagtgcat
gcagatcctagtggtccaaagaatagtcaaaatgatgcatcctttaagagtaagcgaagc
ataccttcaaggaaatcatcttctaattcagtgaagatgcatggttcaggaaaacctgat
aaagtgagtcgcttgtcccctgatgatggttttgaacccacaagggaaagttgggataat
aagctcatgaatgccagcgggacttatagtggagggactaagatgtctgaggtcattcaa
agaaagtgcaagactgtcattaccaagctccaaaagaaaatagagaagggaggtcatcaa
ataattccactgctacatggtctgtggaaaagaattggtagttctggttgcatgggtggg
tctgaggatagtccgtttggtttacagacaattgatctacgtgttgatgagtctgagtac
agcggagtgctcgaatttgtgtctgatgtacagctgatgttaaaacgtgcagtacaatac
tttggtttctcacatgaggtgagatctgaagcaaggaaagtacatgatcttttctttgac
atcttgaagatagagtttccggagactgattttcgagaagcaaggaattccatctctttt
gctggaccagcagcttctactacacccggtgcgtcttcacggctgatgactgtaggtcaa
aacaagagacacaaactgataaatgaaatggaacctgactctagcccactgctgaagccg
cagacacgtggaacactccatgccggcgaagatgccaagtctaagagtcatgtggctcaa
agagaaacaagatttggtggtagcagcagccgggagcttagccaaaaggatgattcccgc
ccattcactcatcccggggagcttgttatttgcaaaaagaaaagaaaagatagagagaag
ttggggttgaaacctgggagtagttctgctggtcctgtctcaccacctggtgtcagctgc
agtatcagaagtccaggctctctcccaactgcgaaggaggggggaaggctaaaccagcag
ccaccccaacagttgaatggcagtggtagcagcagctctgttggctgggcaaaccctgtg
aagagattgagatcagattcctcaagaagacggcaaagtcatttgtga
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integrated database retrieval system