KEGG   Solanum dulcamara (climbing nightshade): 129886554
Entry
129886554         CDS       T09577                                 
Name
(RefSeq) ATP-dependent helicase BRM
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129886554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdul03021]
    129886554
   03036 Chromosome and associated proteins [BR:sdul03036]
    129886554
Transcription machinery [BR:sdul03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     129886554
Chromosome and associated proteins [BR:sdul03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     129886554
  Chromatin remodeling factors
   BAF complex
    129886554
   PBAF complex
    129886554
   GBAF(ncBAF) complex
    129886554
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD QLQ Bromodomain AAA_14 HSA
Other DBs
NCBI-GeneID: 129886554
NCBI-ProteinID: XP_055817253
LinkDB
Position
4:complement(15326531..15339424)
AA seq 2235 aa
MQSGGGAQQGGVAGAGGHGRNTAASASASPSSSSSASHMGLDQQKLHQQHQRQSLQQQFL
RRPEGNEAILAFQTGSPHGILGGGNFVGPSGSMQLPQQSRRYIEQHGSPTIREDGQNRSQ
GFEQQMLNPVQQAYLQYAYQAAQQKSALGMQHQQQMKMGMFGPSAKDQDPRIANMKMQEL
VAMQAANQAQASSSKISSEQHFSRSEKQSDQGQQLMTDQRPDPKLPSQPTLLGQTVATKP
MQAPPSQQSMANMTSNSLSMAAQMQAMQALAYERNLDLSLPANANIMAQLIPIMQSRMIA
QQKVPENNVHVQSSSGHMPKQQVSSPQVANDSSPHAHSSSDLSGSSSAKTRQAVTTGPLA
ASHSVASINNPNNIPQQQFSAHGRENNLPPRQPIMVSSGLPPMHYPQSSVNPNQGVDNTS
LPKPSSNSQETLQTQYARQLSRPSPHSAASSPDGNLGNSLMFQGGNVRQVQPQHLGFSRQ
QLHVLKAQILAFRRIKKGDGTLPRELLQAIIPPPLDVQMQQTFPPGGTVNQEKPSGKGSE
DNRRPTEPSEKGPQLVVPSNGLNGSEEEVTREENTAAATAPVPGSTTETKETASVVLPGK
EEQRIMVHASKSDQDADRAIQNIPSRGDIAPDRGKTVASQVTGSDTTQAKKPMQSSATQQ
KDTGPARKYHGPLFDFPSFTRKHDGFGPSMMMNNNNNLTLGYDIKDLLMEEGSEIHKRKR
EESIKKIGDILAINLERKRIRPDLVLRLQIEEKKLRLAGVQARMRDEIDQQQQEIMAMPD
RHYRKFVRLCERQRQDLSRQVQASQRANREKQLKSIFQWRKKFLESHWAIRDARTARNRG
VAKYHERMLREFSKKKDDNRNERMEALKNNDVERYREMLLEQQTNVPGDGAERYAVLSSF
LSQTEEYLHKLGGKITATKKQQEVDEAANAAAVAARAQGLSEEEVRAAAACAREEVMIRN
RFSEMNAPRDGSSVNKYYHLAHAVNERVIKQPSMLRAGTLRDYQLVGLQWMLSLYNNKLN
GILADEMGLGKTVQVMALIAYLMEFKQNYGPHLIIVPNAVLVNWKSEFLNWLPSASCIFY
VGGKDQRSKLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVL
ARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEGPTH
NADDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLRCRMSGFQSAVYD
WIKSTGTLRVDPEDEKRRAEKNPNYQPKTYKVLNNRCMELRKTCNHPLLNYPYLNVTKDF
LVKSCGKLWVLDRILIKLQRTGHRVLLFSTMTKLLDILEEHLQWRRLVYRRIDGTTSLED
RESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKNEEQAVARAHRIG
QKREVKVIYMEAVVDKIASHQKEDEYRGGVVDSDDDLAGKDRYMGSIESLIRNNIQQYKI
DMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETLHDVPSLQEVNRMIARSEEEIE
QFDQMDEECDWEEEMTRYDQVPKWLRATSKDVNTAIANLAKKPSKNVLFSSGVGVDSSGL
APESEKRRGRPKGKKVPIYTELDDDNGEFSEASSGERNGYSAHEEGEIGEFEDDEFSGAV
GATPVNKDQSEEDGPPFADRYEYHQGPLGAIKTRVPEQVGSSGSSSDNQRPTQIVSSSVS
SQQKFGSLSALDARPSSRAKRMADELEEGEIAVSGDSHVDLQQSGSWIQDRDEGEEEQVL
QPKIKRKRSLRVRPRHAAERPEETLIEKPAVHRGDSSQMAFQGDRRYDLQLRNDRGHKVH
ADPSGPKNSQNDASFKSKRSIPSRKSSSNSVKMHGSGKPDKVSRLSPDDGFEPTRESWDN
KLMNASGTYSGGTKMSEVIQRKCKTVITKLQKKIEKGGHQIIPLLHGLWKRIGSSGCMGG
SEDSPFGLQTIDLRVDESEYSGVLEFVSDVQLMLKRAVQYFGFSHEVRSEARKVHDLFFD
ILKIEFPETDFREARNSISFAGPAASTTPGASSRLMTVGQNKRHKLINEMEPDSSPLLKP
QTRGTLHAGEDAKSKSHVAQRETRFGGSSSRELSQKDDSRPFTHPGELVICKKKRKDREK
LGLKPGSSSAGPVSPPGVSCSIRSPGSLPTAKEGGRLNQQPPQQLNGSGSSSSVGWANPV
KRLRSDSSRRRQSHL
NT seq 6708 nt   +upstreamnt  +downstreamnt
atgcaatctgggggtggagctcagcaaggtggtgtcgccggagccggtggacatggccgg
aacacggcggcatcagcctcagcttctccttcatcatcttcttctgcctctcatatgggg
ttggatcagcagaagctgcatcaacaacaccaacggcagtcattacaacaacagttcctt
agaaggcctgaaggaaacgaagctattctggccttccagactggcagtccccatggaatt
ttaggtgggggtaattttgttggaccttctggatccatgcagttgcctcaacagtcgagg
aggtatattgaacagcatggttctcccaccattcgagaggatggacagaacaggagccag
ggctttgagcaacagatgttgaatcctgtccaacaggcatacctgcagtacgcttaccag
gcagcgcaacagaagtcagctcttgggatgcaacatcagcagcaaatgaaaatgggaatg
tttggcccttctgcgaaggaccaagatcctagaattgctaatatgaaaatgcaggaactt
gttgccatgcaggcagcgaaccaggcccaagcatcatcatcaaagatatcctcagagcaa
catttctctcgtagtgagaaacaatcagaccaggggcagcagttgatgaccgatcagaga
ccagacccaaagcttccttcccagccaacattgcttggccaaacggtagctacgaagccc
atgcaggctccaccatctcaacaaagcatggcgaacatgacgagtaactctctttctatg
gctgcacagatgcaagcaatgcaggctctggcttatgaacgtaatcttgatctgtcacta
cccgcaaatgctaacattatggcacagctaattccgatcatgcagtccagaatgattgcc
cagcagaaagtgcctgaaaacaatgtgcatgttcaatcgtcatcaggtcatatgccaaag
cagcaagtttcatcacctcaagttgcaaatgacagttcgccccatgctcattcttcaagt
gatttgtcggggtcaagttctgctaaaacaaggcaggctgttacaaccggtcctctcgct
gcgtctcatagcgtagcttcaattaataacccaaataatattcctcagcagcagttttct
gctcatggcagagagaacaatttgcctcctagacaaccaattatggttagcagtggatta
cctcctatgcattacccccagtcatctgtaaacccaaaccagggtgtggataacacctcg
ctgcctaaaccctcctcaaattcccaagaaaccttgcagacgcagtatgccaggcagttg
agtcgaccttcaccacattctgcagcttcttctccagatgggaacttggggaattccctt
atgtttcaaggtggaaatgtccgtcaggtgcaaccacaacatctggggttcagtaggcag
caacttcatgttcttaaagcccaaatacttgcatttagacgtataaagaaaggagatggg
acattaccacgtgaattactccaagctattattccgccacctctggacgtgcaaatgcag
caaacatttcctcctggtggtacagtaaatcaggagaaaccatcaggaaaaggttcagaa
gataacagaagacccacggaaccaagtgagaagggtcctcagcttgtagtaccatctaat
ggactgaatggttcagaggaggaggtcacaagagaggagaacacagctgccgcaaccgca
cctgtgccaggtagcacaactgagacaaaggagactgcatcagtggttcttcctggaaaa
gaggagcagcgaatcatggtacatgctagtaaatctgaccaggatgctgatcgtgctatt
cagaatattcctagcagaggtgatattgcaccagataggggtaaaactgttgcatcacaa
gttactggttctgatactactcaggcgaaaaaacctatgcagtctagtgctactcaacaa
aaagatacaggcccagctcggaagtatcatggaccattatttgattttccttccttcact
cgaaagcatgatggttttggaccatccatgatgatgaacaacaacaataatttaacattg
ggttatgatatcaaggatcttctaatggaggaaggctcagaaattcacaagagaaaaagg
gaggaaagtataaagaagattggtgatatactagctattaatttagagaggaaaaggatt
agaccagatcttgttctaagattgcaaatagaagaaaagaaactccgacttgctggtgta
caggcacgcatgagggatgagattgaccaacagcagcaggaaataatggcaatgcctgat
aggcattaccgaaaatttgtaaggctatgcgagcgtcaacgtcaggatctatctaggcaa
gtgcaggcctcccagagagctaacagagaaaaacaattaaaatctatttttcaatggcgt
aagaagtttcttgagtctcactgggcaatacgtgatgctcgaactgcacgcaacagggga
gtagctaagtatcatgagaggatgttgagggagttctcaaagaaaaaggatgataaccgg
aatgaaagaatggaggcgttgaagaataatgatgttgagagatacagggagatgttgcta
gagcagcagaccaacgtccctggtgatggtgctgagagatatgctgttctttcatcattt
ttgagtcagacagaagagtatcttcataaattgggaggtaaaattacagcgacaaaaaaa
caacaggaggttgacgaggctgcaaatgctgctgcagttgctgcacgtgcacagggccta
tctgaagaagaagtaagagctgcagcagcctgtgctcgggaggaagtcatgataaggaat
cgtttctctgaaatgaatgcacccagagatggttcatcagttaacaagtattatcatcta
gcccatgctgtgaatgaaagggttatcaagcagccttccatgttaagagctggaactttg
cgagactatcagcttgttgggttgcagtggatgctttctttgtataataataagctaaat
ggtatattggctgatgagatgggtctagggaagactgtgcaggttatggcattaattgct
tacttgatggaattcaaacaaaactatggaccacatcttataattgtgccaaatgcagtt
ctagttaattggaagagtgagtttctcaattggcttccatctgcgtcctgcattttctat
gttggtggaaaggatcaaagatcgaagttattttcgcaggaagttttagcgatgaagttt
aatgttctcgtgactacgtacgagttcatcatgtacgatcgttctaaactttcaaaagtc
gactggaagtatataataattgatgaagctcaacgtatgaaggatagagaatctgttctt
gctcgtgatcttgaccgatatcgatgccaaaggcgcttgcttctcacagggacaccattg
cagaatgatctgaaggaattatggtcacttctaaatctactacttccagaagtatttgat
aatcgcaaagcatttcatgattggttctctaagccctttcagaaagaaggtccgactcac
aatgctgatgatgactggcttgagactgagaagaaggtcattgttatccatcgacttcac
caaattcttgagcctttcatgctcaggcgtcgggttgaagatgttgaaggttcacttccg
cccaaggtctcagttgtcttaaggtgcagaatgtcaggttttcagagcgctgtttatgat
tggatcaagtctactggtacacttagagttgaccctgaagatgagaagcgaagggctgaa
aaaaatccaaattaccagcctaaaacatacaaagttttaaataataggtgtatggaactt
cggaaaacttgcaaccatcctttgcttaactatccatatctcaatgttacaaaggacttc
cttgttaaatcatgtgggaaattgtgggttcttgatcggatattaattaaacttcaaaga
acagggcacagggtgcttctttttagtaccatgacaaagctgcttgatatcttggaggag
catttgcagtggcgacgactcgtctatagaagaattgacgggacaacaagcttagaggac
cgtgaatcagctattgtggattttaatagtccagatactgattgctttatcttcttgcta
agcattcgtgctgctgggcgtggattaaatctgcaaactgctgacactgtcatcatctat
gatcctgatccaaaccccaaaaatgaggaacaggcagttgcaagagcccatcgtattggg
cagaagagagaagttaaagtcatttatatggaggcagttgttgacaaaattgcaagtcat
cagaaagaggatgaataccgtggaggcgtagttgattctgatgatgacctcgcaggcaag
gaccgctatatgggctctattgagagtctcattcggaataacattcaacagtataagatt
gacatggctgatgaagttataaatgctgggcgttttgatcaaaggactacacatgaagag
cgacgtttgactttagagacgttattacatgatgaggagagatatcaggagacacttcat
gatgttccctctcttcaggaggtaaatcgcatgattgctaggagtgaagaagagatagaa
caatttgatcaaatggatgaagaatgtgattgggaagaggagatgacaagatatgaccag
gttccgaagtggcttcgtgctaccagtaaggatgttaatacggccattgccaatttagca
aaaaagccctcaaagaatgtcttattcagtagtggtgttggtgtggactccagtggatta
gctcctgaatctgagaagagaagggggcggcccaaaggtaagaaggttcctatttacaca
gaattggacgacgacaatggagagttctctgaagcaagttctggggagaggaatggatat
tcagcccatgaagaaggtgaaattggggaattcgaagatgatgaatttagtggtgcagtt
ggcgctacaccagttaacaaagaccagtcagaagaagatggtcccccttttgctgataga
tatgaataccaccaaggtccactaggtgctataaagacacgtgtacctgaacaagtgggt
tcatcaggatcatcttcagacaaccaaaggccgacacaaatagtatcatcgtctgtgtca
tctcagcagaagtttggatccctttctgcattagatgccaggcccagttctcgggccaaa
aggatggcagatgaattagaggaaggagaaattgcagtatctggagactcacatgtggat
ctccagcaatctggtagttggatccaagatcgtgatgaaggtgaagaagaacaggtgttg
cagcccaaaataaaaaggaaacgcagtttgagggttcgaccaaggcatgctgcagaaagg
ccagaagagacactcattgagaagccagctgtgcatcgtggagattcttctcagatggca
tttcaaggggatcgtagatatgatcttcaattgagaaatgatcgtggacacaaagtgcat
gcagatcctagtggtccaaagaatagtcaaaatgatgcatcctttaagagtaagcgaagc
ataccttcaaggaaatcatcttctaattcagtgaagatgcatggttcaggaaaacctgat
aaagtgagtcgcttgtcccctgatgatggttttgaacccacaagggaaagttgggataat
aagctcatgaatgccagcgggacttatagtggagggactaagatgtctgaggtcattcaa
agaaagtgcaagactgtcattaccaagctccaaaagaaaatagagaagggaggtcatcaa
ataattccactgctacatggtctgtggaaaagaattggtagttctggttgcatgggtggg
tctgaggatagtccgtttggtttacagacaattgatctacgtgttgatgagtctgagtac
agcggagtgctcgaatttgtgtctgatgtacagctgatgttaaaacgtgcagtacaatac
tttggtttctcacatgaggtgagatctgaagcaaggaaagtacatgatcttttctttgac
atcttgaagatagagtttccggagactgattttcgagaagcaaggaattccatctctttt
gctggaccagcagcttctactacacccggtgcgtcttcacggctgatgactgtaggtcaa
aacaagagacacaaactgataaatgaaatggaacctgactctagcccactgctgaagccg
cagacacgtggaacactccatgccggcgaagatgccaagtctaagagtcatgtggctcaa
agagaaacaagatttggtggtagcagcagccgggagcttagccaaaaggatgattcccgc
ccattcactcatcccggggagcttgttatttgcaaaaagaaaagaaaagatagagagaag
ttggggttgaaacctgggagtagttctgctggtcctgtctcaccacctggtgtcagctgc
agtatcagaagtccaggctctctcccaactgcgaaggaggggggaaggctaaaccagcag
ccaccccaacagttgaatggcagtggtagcagcagctctgttggctgggcaaaccctgtg
aagagattgagatcagattcctcaagaagacggcaaagtcatttgtga

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