Solanum dulcamara (climbing nightshade): 129886599
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Entry
129886599 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129886599
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129886599
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdul04812
]
129886599
Enzymes [BR:
sdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
129886599
Membrane trafficking [BR:
sdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
129886599
Cytoskeleton proteins [BR:
sdul04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
129886599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_22
AAA_16
TIP49
NPHP3_N
AAA_14
Vps4_C
Mg_chelatase
DUF815
AAA_2
AAA_25
RNA_helicase
MCM
IstB_IS21
nSTAND3
AAA_24
Guanylate_kin
bpMoxR
MIT
AAA_28
AAA_7
AAA_33
ABC_tran
AAA_17
PhoH
Parvo_NS1
AAA_18
AAA_30
NACHT
DUF4368
Motif
Other DBs
NCBI-GeneID:
129886599
NCBI-ProteinID:
XP_055817336
LinkDB
All DBs
Position
4:complement(15922528..15936150)
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AA seq
491 aa
AA seq
DB search
MSFLKDLAETLSSIFSDTPSSPSSLNDPQQNSGDRTMDGVATGNERTAYKLKGYFELAKE
EIAKAVRAEEWGLTDDAISHYHNAQKILAEGISTPVPSYIASSEHEKVKSYRQKILKWQS
QVSGRLQTLSRRAGGTSSVKHSEPQTQRVAVSESSSSARKGASLSVPGSRKVSSVMRVPS
NSISSNKPSQESATASGSDPKLVEMINSVIVDRSPSVKWEDIAGLEKAKQALLEMVILPT
KRKDLFTGLRRPARGLLLFGPPGTGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKL
VKTLFMVAISRQPSVIFMDEIDSIMSTRTTNENEASRRLKSEFLVQFDGVTSNSNGLVIV
IGATNKPQELDDAVLRRLVKRIYIPLPDASVRRQLLKHRLKGKAFSLPDGDLERLVRDTE
GYSGSDLQALCEEAAMMPIRELGANILSVEANQVRGLRYGDFQKAMTVIRPSLQKSKWEE
LERWNQEFGAN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctcaaagacctggcagaaaccctaagctcgatcttctctgatactccatca
tcgccttcgtctctgaacgatcctcagcagaactccggcgatcggacgatggatggcgtt
gccaccgggaacgaacggacggcgtataagctaaaaggctacttcgaattggcaaaagaa
gagatcgccaaagctgttagagctgaagaatggggcttgactgatgatgcaatttcacat
taccacaatgctcaaaagatactcgccgaaggcatttctactccggttccttcctatata
gcttctagtgaacacgagaaggtgaaatcatatcgtcaaaagatattaaaatggcagtct
caagtgtcaggcagacttcagactctaagtcgacgagcaggtggcacatcttctgtcaag
cattcagaaccacaaacccaaagagtggctgtttcagaatcaagttcatctgctcgaaaa
ggagcatctctatctgtacctggttcaaggaaagtcagctctgttatgagggttccgagt
aatagcatatcaagcaataaaccttcacaggaatctgccactgctagtgggtctgatcca
aagttggtggagatgataaattctgtaattgtggatagaagcccttctgttaaatgggaa
gatattgctggccttgaaaaggcaaagcaagctcttttagagatggtaattctaccaacc
aaaagaaaggacctcttcactggcttaagaaggcctgctagaggtctacttctttttggc
ccaccaggtactggaaaaaccatgctggccaaagcagtagcatcagagtcgcaagcaaca
tttttcaatgtgtctgcttcttcgttaacatcaaagtgggtcggagagggtgaaaagctt
gtcaagacactttttatggtagccatttccaggcagccatctgtaattttcatggatgag
atagatagtattatgtcaactaggactaccaatgagaacgaagcaagcagaaggttgaag
tcagagtttctagttcagtttgatggggtgacatcaaattccaatggcctggtaattgta
attggtgcaacaaataagccacaggagttggatgatgctgttctaaggagattggtgaaa
agaatatatatacctctacctgatgctagtgtaagaagacaacttctgaaacacagacta
aagggaaaagccttttctttgcctgatggagatctagaacgactagtgagagacacagaa
gggtattctggaagtgatcttcaagccttatgcgaggaggctgcaatgatgccaatcaga
gagcttggtgctaacattctctcagtcgaggcaaatcaggtgaggggtttaagatatgga
gattttcagaaggccatgacagtgattaggcctagtctgcaaaagagcaagtgggaggag
cttgaaaggtggaatcaagagtttggtgcaaactaa
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