Solanum dulcamara (climbing nightshade): 129886680
Help
Entry
129886680 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129886680
KO
K23325
transducin beta-like protein 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdul03012
]
129886680
Translation factors [BR:
sdul03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129886680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
WD_LRWD1
DUF6556
Beta-prop_EIPR1
Beta-prop_Vps41
NBCH_WD40
Pep3_Vps18
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
DUF4834
Nucleoporin_N
Chordopox_A13L
DUF3306
Motif
Other DBs
NCBI-GeneID:
129886680
NCBI-ProteinID:
XP_055817443
LinkDB
All DBs
Position
4:complement(16931822..16942768)
Genome browser
AA seq
441 aa
AA seq
DB search
MDSMLPVAILSAIIGIVIAFLVFGNYFQKRKSEVESVAKPETIQTNQKTSKPQQSHKNTS
KKSQAKSHSHTADHKDANKKHHPLDLNTLKGHGDIVTGVCFLPNAQSLATACADGVVRIF
KLDDASSKSFKFLRINLPAGGHPTAVAVADEASSVAVACHVLFGSSLYMYGEEKPKADAD
SKQVKLPLPQVKWEQHKVHDKRAILTLVGTKATYGSADGSTIIVSCSEGTDIVLFHGKSG
KIVGNVDTNQLKNNMATISPNGRFIAAAAFTADVKVWEIVYSKDGAVKEVSRIMELKGHK
SAVTWLCFSPNSEQIITASKDGTIRVWNINVRYHLSEDPKTLKVFPIPLKDASGTTLHYD
RLCVSPDGKILATTHGSMMQWLCTETGFVLDTAEKAHDGDITDMAWSPSPIPMGDKQVLV
LATASVDKKVKLWAAPSLNAS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggattcgatgcttccagttgcgattctatcggcgatcatcggaattgtgattgctttt
ctagttttcgggaactatttccaaaagaggaaatcggaggttgaatctgtcgccaagccg
gagacaattcaaaccaatcagaagacttcaaagcctcagcagtctcacaagaacacttcg
aagaaatcgcaagctaaatctcattctcacaccgccgatcataaggatgcaaacaaaaag
catcacccactggacttgaatactctaaaaggtcatggggatattgtcacaggagtttgc
ttcttacccaatgcacagtctttggcaactgcttgtgctgacggtgttgttaggatcttc
aagttggatgatgcttcaagcaaaagttttaagtttctgagaattaatttgccagctgga
ggtcatccaactgcagttgcagttgctgatgaagcttcctcggttgcagtggcatgccat
gttctttttggttcttccctgtacatgtatggtgaagagaaacctaaagcagatgctgat
tccaaacaggtcaagcttccccttccacaagtcaaatgggaacagcataaagttcacgac
aagagagcaatcctaactctagttggtaccaaggcaacttatggtagtgccgatgggagt
acaatcattgtttcatgttctgaaggtactgatattgtgctttttcatggaaaaagtggc
aagattgttggaaacgtcgatactaatcaactcaaaaataacatggctactatatctccc
aatggacgttttatagctgctgcagcttttactgctgatgtcaaggtttgggagattgtg
tactcgaaggatggtgctgtaaaggaggtttcgaggattatggagctcaaggggcataag
agtgcagtgacgtggctatgctttagcccgaattctgaacaaataatcactgcatcaaag
gatggtaccatcagagtgtggaatattaatgtgcgctatcatctttctgaggaccctaag
acattaaaggtgttccctattccccttaaggatgcaagtggcacaactttacactatgat
cgtttatgtgtatcacctgatggaaagatattggccaccactcatggttcaatgatgcaa
tggctatgtacggagactgggtttgttttggatacagctgaaaaagcacatgatggtgat
atcactgacatggcatggtcgccttctccgattccaatgggtgacaagcaagttctggtg
ttggccacagccagtgtcgataagaaagtgaagttgtgggcagctccatccctgaatgca
tcatga
DBGET
integrated database retrieval system
