Solanum dulcamara (climbing nightshade): 129886726
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Entry
129886726 CDS
T09577
Name
(RefSeq) nuclear pore complex protein NUP62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129886726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129886726
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129886726
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
FapA
Motif
Other DBs
NCBI-GeneID:
129886726
NCBI-ProteinID:
XP_055817516
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Position
4:complement(17874262..17884994)
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AA seq
740 aa
AA seq
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MSTGFSFSSSTAPFSFSSNPSFSTTPSVTATTSSTSGSSPFSMAFSNPNPTSSAPSFGFG
TSTTSASSAPSYGFGSSPSFGFSSSAASASSSTPSLFGSSSGSGTTSNLLGSSSSSGSGI
TTNFFGSTTSASSSPLFGANSGSTDANSSPFGGPSLFGSSGKPSPGLFGSSLASGSYSGL
SLFGSSSFLSSTSASTGNAATSASTTPFSSSIFGSSSSASSSPFGSSSTTPSFGFPSSAA
SLSFQSASSSASSSPAPSFSSSAAANSLSSSSAFSFPGASPASSAPAFSLLSTSTTTSVS
STPGFSLAAASTSSAVSSPAFSFSTSSSAASGPAFSLSTPSSASPAPSFSFSMPATASSS
TSPFSASTALSFSVAKGTGSSVAASSSAPVSKPASTAFSISSSPLFSTVTTPTSISTTAA
ATGASSTTSGTGLSLTFPAPTSSASTTSAVDASPIAGFGTSAPSTSFSLSSKASAPALSS
QSQSTAAVPSFGVPSTTSGTATSSAAQTSSALGVTSSSGTTSTSTVVATSTPKLPSEITG
KSVEEIIKEWNAELQERTAKFRKHSNAIAEWDKRILHNRDILLKLESEVAKVVETQGSLE
RQLELIETHQEEVDKALQSMEEEADRIYRDEKGVILDDEAASTRDAMYEQAEFVEREMEK
MTEQIKSIINTFNACQGGELEATDGMTPLDVVVRILNNQLSSLMWIDEKAGEFSSRIQKL
ASEGPAANRESTGPKLWLTR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaggcttttcattctcctcttctactgcacccttctctttctcttcaaacccg
tctttttccaccaccccctctgtcaccgctacgacatcgtctacttccggttcttcccca
ttttccatggccttctcaaaccctaatcccacctcctctgctccttcttttggcttcggt
acttctacgacttcagcctcttctgctccttcctacggtttcggctcttcaccgtcgttt
gggttttcatctagtgctgcttctgcttccagttccacacccagtctatttggatcttct
tccggttcgggtaccacttcaaacttattaggatcatcttcatcttccggttctggtatc
actacgaatttcttcggatcaactacatctgcaagtagttcgccgttgtttggggcaaat
tcaggtagcaccgatgccaattcatcccctttcggtggtccttcacttttcgggtcgtca
ggtaagccctcgccgggtttgtttgggtccagtttggcttctggttcatattcgggctta
agcttgtttggttcttcttcgtttttatcatcaacttctgcttctactggaaatgcagca
actagtgctagtacaactccattctcttcatctatatttgggtcgtcttcttcagcatca
tcttcaccttttggatcatcttcaacaactccttcgtttggttttccgtcatcagcggcc
tcactttcgtttcagtcagcttcgagttcagcttcttcttcacctgcaccttcgttttcc
agctcagcagccgccaattccttatcttcttcatctgcattttccttccctggtgcttca
cccgcaagttctgccccggcattttcattgttaagtacttcaaccaccacttccgtatcc
tctacaccgggattttctcttgctgctgcatcaactagttctgcagtgtcctcaccagca
ttttcattttcgacctcgagctcagcagcatcaggtccagcattttcattatcaacgccg
agttcagcgtcacctgcaccttcattttctttttctatgcctgctacagcttcttcatcc
acatcacctttttcagcttctactgctctgtcattttcggttgcaaaagggacaggaagc
tctgtagcagcttcttcaagtgctccggtgtcaaaacctgctagtactgcgttttcaatt
tcttcatcgcctttgttttcaactgttactacccccaccagcatttctacaactgcagct
gctactggagcttcttctacaactagtgggactggtttatctctgacatttcctgcaccc
acttcttcagcttcaacaactagtgctgttgatgcatctccaattgctgggtttggtacc
tctgccccatctacaagtttttcattgtctagcaaagcatctgcaccagctttatcctca
cagtctcagtcaactgcggctgtgccaagctttggtgtcccaagcacaacttctggcact
gcaacaagttcagctgctcaaacatcatcagccttgggtgtgacttctagtagtgggact
acttcaacttctactgtagttgccacttccacgccgaaattaccatcagaaattacaggg
aagtctgtagaagagatcatcaaggaatggaacgctgagctgcaggaacgcactgcaaaa
tttagaaaacactctaatgcgatagctgaatgggacaaaaggatcttgcataaccgtgat
attcttctcaaacttgagagtgaagttgcaaaggttgttgagactcaaggcagcttagag
cgacagctggagctgattgagactcatcaggaagaggttgacaaggcattgcaaagcatg
gaagaagaagctgatcgaatttacagagacgagaaaggagtgattcttgatgatgaagct
gcatcaacaagggatgcaatgtatgaacaagccgagtttgtggagagggaaatggagaag
atgacagagcagatcaagtcaatcattaatacttttaatgcttgccagggcggagaactt
gaggcaactgatggaatgacaccgcttgatgttgttgtccgaatcttgaacaatcaattg
agttcactgatgtggattgatgaaaaggctggagaattctcatctcgtattcagaagctt
gcaagtgaagggcctgctgccaatcgtgaatcaacgggtcctaaattatggttgactcga
tga
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