Solanum dulcamara (climbing nightshade): 129886758
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Entry
129886758 CDS
T09577
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129886758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129886758
Enzymes [BR:
sdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
129886758
Transfer RNA biogenesis [BR:
sdul03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129886758
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-GeneID:
129886758
NCBI-ProteinID:
XP_055817567
LinkDB
All DBs
Position
4:complement(18521671..18559058)
Genome browser
AA seq
1085 aa
AA seq
DB search
MAILALPLITSILKPHKTHFSFLPLPIILQRRFFSKSSTVSAVSASSSFSSVSHNSEHQK
KSSVPTFQQAIQRLQEYWGSVGCAVMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPS
IRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVNAHDIRFVEDNWE
SPVLGAWGLGWEVWMDGMEITQFTYFQQAGSIQLMPVSVEITYGLERILMSLQGVDHFKK
IQYADGITYGELFLENEKEMSAYYLEHASVDHIQKHFDLFEAEARRLLDLGLAIPAYDQL
LKTSHAFNVLDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRESLGHPLGVVSHSAHLV
VQREVSEEATGKVPSEPRLFVLEIGTEELPPNDVSSACKQLKDLIVQLLNKQRLPHGEVQ
THGTPRRLVVSVEKLHSKQVEHEVEIRGPPVSKAYDKEGNPTKAAEGFCRRNNVPLDSMY
RRAEGITEYVYARLVEPAHLAFEVLSEELPGIIASISFPKSMRWNSDVAFSRPIRWILAL
HGGVVLPFMYAGVVSGNVSHGLRNTPSATVKILDAETYANVMQDAGILADVEHRKKTITK
NSNDLAKSVRGHIVMKSDLLDEVVNLVEAPLPVLGKFDESFLELPKELLIMVMQKHQKYF
AMTDENGLLLPYFVTVANGSIDKKVVRKGNEAVLRARFEDAKFFYAMDTNRKFSEFRTQL
KGILFHEKLGTMLDKMTRVQNLASEVGLSLGLSEDKLKIIQDAASLAMADLATAVVAEFT
SLSGTMARHYALRDGYSKELVGDLIALLVLLQKKRLPKHLGDEIADALFEISLPRFSGDM
LPKTEVGSVLAITDRLDSLVGLFAAGCQPSSSNDPFGLRRISYGLVQLLVEIDRNVDLRQ
ALELAAAVQPIEVDVRTINDAHQFVTRRLEQFLMDKGISPEVVRSVLSERARRPGLATKS
VYKMDSLSKGELLPKVVEAYSRPTRIVRGKDANVDAEVDDQALETNEEKALWSTFLSLRS
KIHPDMEVDDFIEASSVLVEPLEDFFNKVFVMVEDERVRTNRLALLKKIADLPRGIVDLS
VLPGF
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcttgcactcccattaatcacttcaattctcaaaccccacaagactcacttc
tcctttctgcctctacctatcattctccagaggcgtttcttctctaaatcttccactgtc
tctgcagtgtccgcttcttcttctttttcttccgtctctcacaattcagagcatcaaaag
aaatcgtccgttccaactttccaacaagccattcaaaggcttcaggagtattggggttct
gtaggatgtgccgtgatgcaatgcagcaatactgaggttggagctgggactatgaatcct
ctaacatatttaagagttctcggaccagaaccgtggaatgttgcgtatgtagagcctagt
attcgtccagatgatagtcgttatggagaaaatccaaatcggcttcaaaggcatacccaa
tttcaggtgattttaaagcctgatccaggaaattcgcaggacctgttcatccgtagcttg
tcagcgttaggtattgatgtcaatgcacatgatattcgctttgttgaggacaactgggag
agccctgtgcttggtgcctggggattgggctgggaggtttggatggatggaatggaaatc
acacaattcacctacttccagcaggctggaagtattcagttgatgccagtgtcagttgag
atcacttatgggcttgagcgtatccttatgtcacttcagggtgttgatcattttaaaaag
attcagtatgcagatggcattacatatggagagctttttctggaaaatgagaaggagatg
agtgcgtattatctggagcatgctagtgttgaccatatacaaaagcattttgatcttttt
gaagcagaagctcgccgtttgcttgatctaggccttgccatacctgcgtatgatcagctt
ttgaagacttctcatgcttttaatgttttagactcgagaggctttgttggggtgacagaa
cgtgctcgttactttgggcgtatgcgtagtttagctcgacagtgcgcacaactttggttg
aagacaagggagtctcttggccatccactaggtgttgtttctcatagtgctcaccttgtt
gttcaaagagaagtctcggaggaagcaacaggaaaggttccttcagagccacgattgttt
gttcttgaaattgggactgaggagttgcctccaaatgatgtatcaagtgcatgcaagcaa
ctcaaggatctgatcgttcagttactgaacaaacaaaggttgcctcatggggaagtacaa
acacatggcaccccacgtagattagtggttagcgttgagaagctacactctaagcaagtg
gaacatgaggtagagattcgtggacctcctgtttctaaagcttatgataaggaaggaaat
cctaccaaggctgctgaaggtttttgtcgcagaaataatgtgcctttagactccatgtat
agacgagctgaagggataacagaatatgtctatgctcgtttagtggagccagcacatctt
gcgttcgaggttttgtctgaagagctacctggtataattgccagcatatcattccccaag
tcaatgcgttggaactctgatgttgcattcagcagacccattcgttggattttggccctt
catggaggtgtagttcttccctttatgtatgctggagttgtaagtggaaatgtatctcat
ggtctacgcaatactccatctgctacagttaagatattggatgcagaaacctatgcaaat
gtaatgcaggatgctgggattcttgctgatgtcgagcatcgcaagaaaacaattacgaag
aactcaaacgatttagcaaaaagtgtacgtggacatattgttatgaagagtgatttgctg
gatgaggtcgtgaatcttgttgaggcaccactccctgtacttggaaaattcgatgagtcc
ttcctagagcttccaaaggaactacttataatggtgatgcagaagcatcagaaatacttc
gccatgactgatgagaatgggctactgttgccatactttgtcacagttgcaaatggatca
attgataagaaggtagttaggaaaggaaatgaagctgtgctaagagctcgatttgaagat
gcaaaatttttctatgcaatggacacaaatagaaaattttctgaattccgtactcaactg
aaagggattcttttccatgagaagcttgggactatgctagacaagatgacacgagttcag
aatttggctagtgaagttgggttgtctcttggattaagtgaagacaaactcaaaatcatc
caagatgcggcctcattagccatggcggatcttgcaactgcagttgttgcagagtttact
tctctctccgggacaatggcacgccactatgcacttagagatggctattcaaaggagctg
gtcggtgatttaattgctttactagtactactgcaaaagaagcggcttccaaaacaccta
ggagatgagattgcagatgcattgtttgagatctcacttccacgattttctggagatatg
ctcccaaaaactgaagttgggtctgttttagcaattactgacaggcttgatagccttgtt
ggcttatttgctgctggctgtcagccaagctcaagtaatgatccatttggtctgcgaagg
atctcctacggtcttgtgcaactcttggttgaaattgacagaaatgtggacttacgacag
gctttagaacttgctgctgcagtgcaacccattgaagtagatgtcaggacaatcaatgat
gcacatcaatttgtgacacgcagactagaacaatttctgatggacaaaggtataagccca
gaagtcgttaggtctgttctttccgagcgtgcaagacgacctggtttggctactaagtcg
gtgtacaaaatggattccttgtccaaaggggagcttttgcctaaggttgttgaagcatat
tcacgtccaacaagaattgttcgcgggaaggatgccaatgttgatgcggaggtggatgat
caagctttagaaacaaatgaagagaaagctttgtggagcactttcttgtcactaagaagt
aaaatccatccagacatggaagttgatgattttattgaagcatcatcagtacttgtagaa
ccgctggaggattttttcaacaaggtctttgtaatggtggaagacgaacgggtcagaaca
aaccggcttgcactgctgaagaaaatagcagacttgccaaggggaatagtagatctctca
gttttaccgggattttga
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