Solanum dulcamara (climbing nightshade): 129886818
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Entry
129886818 CDS
T09577
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129886818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdul03032
]
129886818
Enzymes [BR:
sdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129886818
DNA replication proteins [BR:
sdul03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
129886818
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
129886818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
Cas_Cas4
AAA_18
ResIII
nSTAND3
DUF7372
PhoH
FCSD-flav_bind
Motif
Other DBs
NCBI-GeneID:
129886818
NCBI-ProteinID:
XP_055817656
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All DBs
Position
4:19640493..19658414
Genome browser
AA seq
1425 aa
AA seq
DB search
MPPKKRTNSGSTKKSTIQNQNLQQQSQPSKFGIQHFFERHTQNALSQKSKTLLVPHNSNS
NSNSLQNSKESSSVSVSKTPRNVLDLRCLDSNETNYGAQKGQNGLNFNKFDEFNSVSLVK
SNGNVVESDNVDVLERIKDKESSLSLKNNESGSSSQSTPTEIVVASGSGEEKNQAEVTPE
FCKSVSLNKRFKFSPGMLIKQSQDDGGDEVTWKISPVNERLHAMSKQLPKMVKVLADSSR
FNSLNTQECSLKKMPPETERKFEKWLCSPPLKALDKSLVCSNMASMGKKNTDHTMDLWEN
NGNSNCQGKTEVTNSQSPFQTPPSLTYGSDKPANMVDPNEATDQLGSRQHKKALIELLDQ
VEDVISVEPQCEEKIAPHGHDGPAKPDAVLQKLSENFCSSDQRKESTIYFLVLEVSEKHG
QVETSGPQCSFKVLRLLNEQSGEERVLQLWDEWCYSVVAPGDTIHVIGEFDSEGKCEINH
GKNFLIVHPDILVSGTRVAGSFSCSRRAVLDERLKSGEYSAAALIGTLLHQMFQAGLIRE
SPSKEFLEDYARVVLQKSLESLYACGVDENDTHKTLIEAIPKLLNWISSFRYSEVSESPS
IDFGSEDGVKKIKVSEVLDIEEMAWAPKYGMKGMIDASLQVNVKSNANVPNEMIMPLEFK
TGKATNGQATMEHSAQVMLYTLLMSERYSQHIGHGLLYYLHTDQTQGITVCRSDLVGLIM
RRNELANDLLKASITQQLPPMLQSPNMCRGCRHLSVCTIYHKAYGGTTEGSGLGSVFDSL
VSHLTNAHTNFLQKWDQLIDLEAKEVEAVKKQIWSSQSLKSDLYAPCLSSLVLDTSERTT
STHFCKGNQFMYHFVHRDWTSLGTHQQDGDALNSSSFPVKNFESSLRSGDYVVLSTEPGG
VLIATGVVVDMSCSRISVSLSKRLRLPGSSRTSQAQDLHKQLWRIHKDEFMGSFAIMRFN
LIQLFLQNEQSSHLRKIIVDLEVPRFDSGCQFSQDPAISYIWSEKNLNDDQRRAILKILT
AKDYALILGMPGTGKTSTMVYAVKALLIRGSSILLTSYTNSAVDNLLLKLKSQGIDFIRI
GRYEVVHEEVRENCISMMDTHGLEEIKQRLEQSKVVAVTCLGITSPLLSNKRFDVCIMDE
AGQTTLPVSLGPLTFASKFVLVGDHYQLPPLVQSAEAREYGMAVSLFCRLSEAHPQAICA
LQSQYRMCAAIMELSNALIYGNRLRCGSSEVENAKIKYTGLPSGPTWIKEAMNPNRPVVF
INTDLLLAFETNDRKAVNNPMEANIIAEIVCRLLSRGILEEEIGIITPYNSQADLIRQAV
STSVEIHTIDKYQGRDKDCILLSFVRSTENPRNYISSLLGDWHRINVALTRAKKKLIMVG
SCITLSNVPLLKILIEKVEEQGGILSVSKKDIAHKPELRRCSNLR
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaagaaaagaacaaattcaggatcgacaaagaaatcaaccattcaaaaccag
aaccttcagcagcaatctcagccgtccaaatttgggatccagcatttctttgaacgccac
acccaaaatgccctttcacagaaatccaaaaccctccttgttcctcacaattctaattcc
aattccaattcattgcaaaactctaaagaaagttctagtgtatcagtatccaaaactcct
agaaatgttttagatttaaggtgtttggattctaatgaaacgaactacggtgcacaaaaa
ggtcaaaatggattgaatttcaataagtttgacgagtttaattcagtgtctctagttaaa
agcaatggaaatgtggtcgaatcagataatgttgatgtgttggagagaattaaggataag
gaaagtagtttgagtttgaaaaacaatgaatcgggtagttcatctcagagtacacctacg
gagattgtggtagcttcaggttcaggggaggagaaaaatcaagcagaagtaacgcctgag
ttttgcaagtcggtatctttgaataagcggttcaagttttctccaggaatgctgatcaag
caaagccaggatgatggaggtgatgaagtaacatggaaaatatctccagtgaatgaacga
cttcatgccatgtccaaacaattaccaaagatggtaaaggtgttggcggattcgtcacgg
ttcaactccttaaatactcaagaatgttcactgaaaaagatgcctcctgagacagaaaga
aagtttgagaagtggctttgttcacctccactgaaggcacttgataaatcgttagtatgc
tcaaatatggctagcatggggaaaaaaaatacagatcacacaatggatttgtgggaaaac
aatggaaactctaattgccagggaaaaactgaagtaaccaacagtcagagtccttttcag
actccaccttctttgacatacggcagtgataagcctgccaacatggtcgatcctaatgaa
gccactgatcagcttggttccaggcaacacaaaaaggcattgattgagcttttagaccaa
gtagaagatgtaatttctgttgaaccacaatgtgaagagaaaattgcaccccatggtcat
gatggaccagctaagccggatgccgttttgcagaaactgtcagaaaacttttgttcaagt
gaccaaaggaaagagtcaactatctattttcttgtattggaggtttctgagaagcatgga
caagttgaaacatctgggccgcagtgctccttcaaggttttgcgcttgctgaatgaacaa
agtggagaagaaagggttttgcaattgtgggatgagtggtgctatagtgttgttgcacca
ggggatactattcatgtcattggtgagtttgacagtgaaggaaaatgtgaaataaaccac
gggaagaatttcctcattgttcatccagatattttagtttctggaaccagggttgctggc
agcttcagttgctcaaggcgagctgtgctggatgagaggttaaaatctggagagtattca
gctgcagcattgattggcacattattacatcagatgtttcaggctgggctgatcagagag
tccccttcaaaagaattcttggaggactatgcaagggtagtgctccagaagagtcttgag
agcctatatgcctgtggagttgatgaaaatgatactcacaagacattgatcgaggcaatt
ccaaaactgctgaattggataagttccttccgatattcagaggtttcagaaagcccaagc
attgattttggaagtgaagatggagttaagaagattaaagtatctgaagtacttgacatt
gaagaaatggcatgggctccaaaatatgggatgaaaggcatgatcgatgcatccttgcaa
gtaaatgtaaaatccaacgccaatgtacctaatgagatgattatgcctctcgaatttaaa
actgggaaggcaacaaatgggcaggcaactatggaacatagtgctcaagtcatgctgtat
acccttttaatgtcggaaagatactcgcagcatattggccatggtctcctgtattatctg
cacacagatcaaacacagggaattacggtttgcagatctgacttggttggcctaataatg
cgtcgtaatgaacttgcaaatgatcttcttaaagcctctataactcaacaattgccacca
atgttacagagtccaaatatgtgcagaggctgtcgccacctcagtgtctgtaccatttat
cataaggcatacggtggcaccacagaaggcagtggcttgggcagtgtgtttgattcactt
gttagccatctaacaaatgcacatactaattttcttcaaaaatgggatcagttgattgac
ttggaggccaaagaagttgaggctgttaagaaacaaatttggtcttcacaaagtttaaag
agtgacctttatgctccttgcttatcttctcttgtccttgatacgtcagaaagaaccaca
tcaacacacttttgcaaaggaaatcaattcatgtatcactttgtacatcgagattggact
tccttgggcactcatcaacaggatggagatgctctgaacagttccagttttcctgtgaaa
aattttgaatcctcgcttaggagtggggactatgtggtattgagcactgaacctggtggg
gtactaatagctactggagttgttgtagatatgagttgctctcgcatctcggtatctctt
tccaaacgcttaaggcttccaggaagcagccggacttcacaggcacaagatcttcataag
cagttgtggcgaattcataaagatgaattcatgggttcatttgctattatgagattcaac
ctcatacaactgtttctgcaaaatgagcagagttctcatctgaggaagattatagttgat
ctggaggtgcctaggtttgatagtggatgccaatttagtcaagatcctgccatttcatac
atttggtcagaaaaaaacttgaatgatgatcagcgtagagccatacttaagatactcaca
gcaaaggattatgcgctgatactaggaatgccagggacaggcaaaacatccactatggtc
tatgctgtgaaggcactgttgataagaggttcatccattttgcttacctcctatacaaac
tcagctgttgacaatttgcttctcaaactgaagtctcagggtatagattttatacgtatt
ggaagatacgaggttgtgcacgaggaagttcgggagaattgcatatcaatgatggacact
catggtcttgaagagataaagcaaaggctagagcaaagcaaagttgttgctgttacatgt
ttggggataactagcccattgctttcaaacaagagatttgatgtgtgtatcatggatgaa
gctggacaaactacgttgccggtatcattgggaccactgacatttgcttcaaaatttgtt
ctagttggggatcattatcaattaccaccacttgtccagagtgcagaagctagagaatat
ggaatggcagtaagcctgttctgcagactatcagaagctcatccccaagcaatttgtgct
ttgcaaagccagtaccgcatgtgtgcagcaataatggaattatcaaatgccttgatatat
ggtaacagattgcgatgtggttcttctgaagtagaaaatgccaaaatcaagtacacaggt
ttgccatctgggcctacgtggataaaggaggctatgaatccaaacagacccgtcgtcttt
ataaacacagatttgttgcttgcatttgaaacaaatgaccggaaagctgtaaataatcca
atggaagcaaatatcattgccgagattgtgtgtagattgttgagcagaggtatattggag
gaagagataggcatcattacaccctacaattctcaggcagatcttatccggcaagctgtt
tccacatcagtggagatacatacaattgataaataccagggaagagataaagattgcatt
ctgctgtcctttgtaaggtcaactgaaaatccaaggaactacatttcttcattgcttgga
gactggcacaggattaacgtggctcttactcgtgctaagaagaagttgataatggtaggt
tcatgcattacgctatcgaacgtgcctctgctaaagattcttattgaaaaagtggaagag
caaggtggcattttgagcgtctctaagaaggatattgctcataaaccagaattgagaaga
tgctccaacctgagatga
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