Solanum dulcamara (climbing nightshade): 129886843
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Entry
129886843 CDS
T09577
Name
(RefSeq) protein transport protein SEC23 C isoform X1
KO
K14006
protein transport protein SEC23
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129886843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129886843
Membrane trafficking [BR:
sdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129886843
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
129886843
NCBI-ProteinID:
XP_055817690
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Position
4:20077568..20103639
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AA seq
764 aa
AA seq
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MTEFLELETQDAVRMPWNVLPGSKSEAAQCVIPVSAIYTPLKPFPNTPTLPYAPLRCRNC
RSVLNPFSIVDFSSTKIWICCFCLQRNHFPPSYQSISETNMPAELFPQYTTIEYESPSEK
ASMTNPVFLFVIDTCVIEEEIGYLKSSLLQVVGTLPENCLIGLITFGTYVHVHELGFGQI
PKVYVFKGSKEVSKDQVLEQMGFFANKLKPTTGVIAGVRDGLSQESISRFLLPASECEFT
LNLILEELQRDPWPVPADHRAARCTGTALSVASHLLGICVPGSGARIMAFLGGPSTEGPG
AIVSKILSEPIRSHKDLDKDSAPLYHKAVKFYEGISKQLVHQGHVLDVFACALEQVGLAE
IKVASEKTGGLVVLAESFGHSVFKDSLKQVFQSGGNDLGLSSNGIFEVNCSKDMKVQGVI
GPCASLEKKGPLCSEVVVGQGNTTAWKMCGLDKTSTFCLIFEVAKKESPDAIAQSANSQF
YFQFLTYYQHPSGQMRFRVTTLSRRWVAGPGSVQDLIAGFDQEAAAVVMARQVSFKMETE
SDFDPIRWLDKSLIHICSRFGDYQKDTPSSFTLSPRFSIFPQFMFHLRRSQFVQVFGNSP
DETAYFRMILNRENVANSVVMIQPSLISYSFHSGPEPVLLDVAAIAADRILLLDSYFTIV
VFHGSTIAQWRKMGYHEQPEHQAFAELLKSPREDAEAIIRERFPVPRLVICDQYGSQARF
MLAKLNPSATYNSDAPPIPGGDIIFTDDVSFEVFLDHLQRLAVH
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacggaattcctagaattagaaacacaagacgccgttaggatgccgtggaacgtattg
ccgggaagcaaatcggaggccgcgcaatgcgtaattcctgtttccgcaatatacacaccg
ttaaaacccttccctaacactcctactcttccttacgcaccactccgttgccgcaattgc
cgatcggttctcaatcctttctccatcgttgatttctcgtctactaagatctggatctgc
tgtttttgtcttcagcgtaatcactttcctccgagttatcagtctatatcggagactaat
atgccggctgagttgttcccgcagtatactaccattgagtacgagagtccttcggaaaaa
gcttcgatgacgaacccggtttttcttttcgtgatcgatacttgtgttattgaagaggag
attggttacctgaaatcatctttgctacaggtagtgggcacattgcctgagaattgttta
attggcctaatcacatttgggacctacgtgcatgttcatgagctagggtttggtcagatt
ccaaaggtttatgtgttcaaggggtcaaaggaagtttctaaagatcaagtgttggagcaa
atgggcttctttgcaaataagcttaaaccaaccacaggtgtcattgctggggttagagat
ggactttctcaagagagtatttctcggtttttgttgcctgcatctgagtgcgagtttaca
cttaacttgatattagaagagcttcaaagagatccttggcccgtgccagcagatcatcga
gctgcacggtgcactggtacagcattgagtgttgcttctcatttgttgggtatatgtgtt
ccaggttctggggccagaattatggcattcttaggtgggccctcaacagaagggccaggt
gctattgtgtcgaagattttgtctgagcccataaggtctcacaaggatctggacaaagat
tctgcaccgttgtatcataaggctgtgaagttttacgagggaatttcgaagcaacttgtg
catcaagggcatgtactggatgtttttgcttgtgcacttgaacaggttggccttgctgaa
attaaagttgcaagtgagaaaactggtggacttgttgttctggcagaaagttttggccat
agtgttttcaaggattctctgaaacaagttttccagtcaggtggcaatgatcttggactg
tcatcaaatggtatttttgaggtcaattgctctaaagatatgaaagttcagggagttatt
ggtccttgtgcttcacttgaaaagaaaggtcctttgtgctctgaggttgtcgtaggtcag
ggaaatacaacagcttggaagatgtgtggtcttgataaaacttcaacattttgtttaata
tttgaagttgccaagaaggagagcccagatgcaattgctcaatctgccaattcacagttt
tatttccagtttttgacatattatcagcaccctagcggacaaatgagatttcgggttact
actctttctagaagatgggttgctggacctggaagtgtacaggacctcattgctggattt
gatcaagaagcagctgctgtggtaatggcacggcaagtttctttcaaaatggaaaccgag
tctgattttgatcccatcagatggctggataagtcattgatacatatatgttctcggttc
ggtgactaccaaaaagacactccatcttcttttactctatctcctcgtttttcaatattt
ccccagtttatgtttcacttgcggcggtctcagtttgtccaggtctttgggaacagtcca
gatgagacggcatattttagaatgattctgaaccgggaaaatgttgctaactcagtcgtg
atgattcagccctctttgatatcttattcttttcattctggtccggaaccagtcctcctt
gacgtggcggcaattgctgctgatagaatccttcttctagattcttattttaccattgtc
gtatttcatggatcaactattgctcaatggagaaaaatgggatatcatgaacagcctgaa
catcaggcatttgctgaactattaaaatctcctagagaagatgcagaggccattattcgc
gaaagatttccagtaccacgtttggtcatttgcgatcaatatggatctcaggcccgtttt
atgctagcaaagttgaatccttctgccacatacaactctgatgctcctcctattcctggt
ggagatatcatattcacggatgacgttagttttgaggttttcttggatcatctgcagcgg
ttggctgttcattag
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