Solanum dulcamara (climbing nightshade): 129886922
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Entry
129886922 CDS
T09577
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129886922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129886922
Enzymes [BR:
sdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129886922
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129886922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
129886922
NCBI-ProteinID:
XP_055817801
LinkDB
All DBs
Position
4:complement(21689110..21714433)
Genome browser
AA seq
1184 aa
AA seq
DB search
MDEERSKIAGNKAMSRPHLVAEKDYTALKELFSHHIESFDHMVDNGLETMLLNIKPIEIV
DSFSTLKLRIWLGKPELFPPQKERASKTMHDALYPFECRQAKLSYMGKFLVDICFQYGDG
AVIREKFNFGQFPIMLKSKLCHLRAADDSKKLISHKEEPSEMGGYFILKGLERVIRLIIL
PKRNYPMSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGRE
YLLPVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSL
FTRAQCLRHIGEHFQPVMTGMQNDCYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLF
SLIDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELS
SLADVKKTIDRSAPKQTGLAIETMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHF
RAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSEGN
VKDFFKMRISILSVLIAIGMTPASPKLVQAGPPELLSVLLDGRIAGYMPSDLIEKAVTHL
RRLKLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRIISAPAEEGNDLELI
GPFEQVYMEISCPDGGDGGRKTLFPATHQEIHPTNILSVVGNLTPWSDHNQSPRNMYQCQ
MGKQTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSG
YDMEDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDS
DGLPYVGQRINPNEPYCSIYNEITSQTTSMKLKGSEPVVVDYVAVDVKNKTNLQKANIRF
RRSRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLL
ESIAAKGGALHGKFVDATPFSNTMKEAESESSSLVDELGSMLTSCGFNHHGVEVLYSGVY
GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGQVDQITRQPLKGRKRGGGVRFGEMERDS
LLAHGAAYLLHDRLHTSSDHHIADVCSECGSVLTSSLIQPPKRAVQADLKLPPAREPKKV
TCVACRSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNGAGA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaagaagcaaaattgcaggaaacaaggccatgtcacgaccgcatttggtg
gcagagaaagattacacagctctgaaagagctcttcagtcatcatattgaatcttttgat
catatggtcgataatggacttgaaaccatgctcttgaatatcaagcccattgaaattgtt
gattccttttccacgctcaagctaagaatctggctcggcaaacctgaattattcccacct
caaaaggaacgcgcttccaagaccatgcatgatgctttatatccttttgagtgtagacaa
gctaaactttcatatatgggaaagtttttggtggatatctgtttccagtatggtgatgga
gctgtaatccgggagaaatttaattttggacagttccctatcatgttgaagtcaaagcta
tgtcacttgagagctgctgatgactccaaaaagttaatttctcacaaggaagagccatca
gaaatgggcggatatttcattcttaaagggcttgagagagtcattcgccttataattttg
ccaaagcgaaactatccaatgagtatggcacggaattcatttcgtgataggcgagaagga
tattctgataaagctgttgttataagatgtgtaagagaagatcagtctgcagtctcactt
aaattgtattatctaaacaatggaagtgcaagacttggattctggatacaaggaagggaa
tacttgcttcctgttggtatcatattaaaggcccttgttgacaccactgatcacgagata
tatgtcaatttaacatgttgctacaatgaggagtgtgaccgcgtaaagggatctgttggc
acccagcttgttggtgaaagagcaaaaattattctggatgaagttcaggccttatctctt
tttacccgagcacagtgcctgcgacatattggggagcatttccaacctgttatgactgga
atgcaaaatgattgttacaaaactgttgctgatgctgtgcttagagactacatatttgtc
catctggataacaatcatgataaattcaatctacttatctttatgttgcagaagcttttc
tctctgatagatcagacttctgtcctagacaatccagactctctgcaaaatcaagaagtt
ctgctgccgggtcacttaattaccatatatctgaaggaaaagctacaagattggctgctt
aaattacaacggtcacttcaggaagaaactgatggtgaaaagaagaagtttgagctaagt
agcttggcagacgtcaagaagactattgatagaagtgctcccaaacagacgggcttggct
attgagaccatgttaaagactgggagattggctacacaatcaggtcttgatttgcagcag
agagctggtatgactgtccaggcagaaaagttaaatttcctccgtttcctttcacatttt
cgagcggttcatcgaggtgcctcatttgctggtcttcgtactacaagtgtgcggaagttg
ttacctgaatcttggggtttcctttgtcctgttcacacacctgatggggagccatgtggg
ttgcttaatcatatgactgcatcttgccgcataacctcatactatgattcggagggcaat
gttaaagacttcttcaaaatgcggatatccatattgagtgtgctgattgcaattggaatg
acaccagcatcaccaaagcttgtgcaagctggtcctcctgaattgctgtctgttctactg
gatggtcgtattgctggctatatgccatcggatttaattgaaaaagctgttacccacttg
cggagattgaaattgtcatcaacatcatcgattccagttgatttggaggttgggtacatc
cctttgagcatgaatggagcatatccaggcctatatctgttcacatctccttctaggttt
gttcgtcctgtaagaattatctctgcacctgctgaagagggcaatgatcttgaactcatt
ggaccctttgaacaggtgtatatggagataagctgcccggatggtggagatggaggaagg
aaaaccttattccctgccacacatcaagaaattcatccaactaatattttgagtgttgtt
ggcaatcttacaccttggtctgatcataatcagagtccacgtaatatgtatcagtgtcag
atgggtaaacaaacaatgggtttctcctcacaagcattaaattgtcgtgctgatcaaaag
ttatatcaccttcagactcctcaaactccaattgtacgcacaaaagcttatgagaagtac
tgtgttgatgactatccattaggaacaaatgcaattgtggcagttttggcttattcagga
tatgacatggaggatgctatggtcttaaataaatcatctgtagatcgtggtatgtgtcat
gggcatatataccagacagaaaccattgacttgactgagcaaagcgccaaatctgatcgt
gctcagagattgtttagaagaagcaatttggataagtcgtctcatcagctgattgattct
gatggtcttccatatgtggggcagaggattaatccaaatgagccatattgtagcatttac
aatgaaataaccagtcagacaactagcatgaagttgaagggttcggagcctgttgttgtt
gattatgttgctgtcgatgtgaaaaataaaacaaatctgcagaaggcgaatatacgtttt
aggcgctccaggaatcctgtaattggtgataaatttagcagccgacatgggcaaaagggt
gtttgctctcaattatggcctgatattgatatgcccttctcaggagttacaggaatgagg
ccagatcttattattaatcctcatgctttcccttcaaggatgacgattgctatgctgttg
gagtcaattgctgctaagggaggtgctttacatgggaagtttgttgatgcaacgccattt
tctaacacaatgaaggaagcagaatcagaatccagttcgctggtggatgaacttggttcc
atgttaacgtcttgtggcttcaatcatcatggtgtagaagtactatatagtggagtatat
gggacagaactgacttgtgaaatatttattggacctgtttattatcagcgtctacgacac
atggtttccgataaatttcaggtccgttctactggacaagtagaccagatcactcggcag
cctctcaaggggcgaaagcgtggtggaggtgtccgctttggtgaaatggaacgagattca
ctccttgctcatggagcagcatatttgctgcatgatagactccataccagttcagatcat
cacattgcagatgtgtgctctgaatgtggaagtgtcctaacatcatcattaattcagccg
ccaaaacgagcagtgcaagcggatttgaaactgccacctgctagagaacccaaaaaggtt
acttgtgttgcttgccgttcaagcaaaggaatggagactgttgcaatgccgtacgtgttt
aaatatctagcggctgaactggcagccatgaacattaagatgaccctcaaactaagtaat
ggggctggagcttga
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integrated database retrieval system
