Solanum dulcamara (climbing nightshade): 129886938
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Entry
129886938 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase ATL76-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129886938
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129886938
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
129886938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
129886938
NCBI-ProteinID:
XP_055817821
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All DBs
Position
1:complement(9740638..9741366)
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AA seq
227 aa
AA seq
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MATISTQLIQEIFTENMHYSRRLLVASPPQYHLEPIMAPSSNPGNSHDDDSKYVLLVVNN
VPIDARVLIILSVIFCGLICTLFLNSIIKCAFRSSSLLLNNSSLNHRNPSTTKLATKGIK
KKTLDTFPVITYNTRLEHPGFDSDCVICLSKFKIGEKVKILPKCNHCFHVKCIDKWLNSH
SSCPTCRHCLIETCPKIVPSDTSSSLPVQEVIVRIEPLQHESVVSSN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatatccacccaattaattcaagaaatattcacggagaatatgcactactca
agaagactacttgtagcttcccctccacaataccaccttgagcccatcatggctccatcg
tccaaccccggaaacagccacgacgacgactcaaaatatgtactactagtggtcaacaac
gtcccgattgatgcaagagttttgataatattgtcagtaattttttgtggcttgatttgt
acacttttcttgaactctatcataaagtgtgcatttaggagctctagcctattgctgaac
aactcatccttaaatcatagaaacccttcgacaacaaagctagcaactaaggggattaag
aagaaaaccctcgatacgttccccgttataacctacaatactaggttggaacatccagga
tttgactctgattgtgtcatttgcttatcaaaatttaaaatcggagagaaagttaagatt
ctacctaagtgtaaccattgcttccacgtcaagtgtatcgataaatggcttaattcccac
tcctcttgccctacttgtaggcattgcctaattgagacttgtccaaaaattgtgcctagt
gatacttcatcatcactaccagttcaagaagtcatagtaaggattgaacctctccaacat
gaaagtgtggtatctagcaattaa
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