Solanum dulcamara (climbing nightshade): 129886945
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Entry
129886945 CDS
T09577
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129886945
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129886945
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
129886945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
zf-HC5HC2H_2
Prok-RING_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
129886945
NCBI-ProteinID:
XP_055817833
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All DBs
Position
1:complement(9759191..9759962)
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AA seq
206 aa
AA seq
DB search
MENFHYSRRLLREAATMAPPPTAGISHDTTDHPPLGHKVNTFDENVIMVLAILVSALICS
FVLNFIIKCACWCSTRILVDSSLLNHTNNNPSSTKLANRGIKKKALETFPVITYTTELKY
PGLNSECVICLSEFGIGEKIKVLPKCNHGFHVNCIDKWLNSHSSCPTCRHCLIETCQKII
PISSAPIQEVIIRMEPIQREDAISNN
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttccactactcaagaagattactccgggaggcggccaccatggcgccgcct
ccaacagccggaatcagccacgatacaactgatcatccaccacttggtcacaaagtcaac
acatttgatgaaaatgttattatggtcttggccatacttgtatctgccttgatttgttca
tttgtcttgaatttcatcataaaatgtgcatgttggtgctctacccgaatattggttgac
tcatccttattaaaccatacaaataataacccttcttcaacaaaattagccaatagaggt
atcaagaaaaaagctctagagacatttccagttataacatacacaactgaattgaaatat
ccaggactcaactctgaatgtgtcatttgcctatcagaatttggaattggagagaaaatc
aaggttctacctaagtgcaatcatggatttcacgtcaactgtatcgataaatggctcaat
tctcactcttcttgccctacttgtaggcactgcctcattgaaacatgtcaaaaaattatt
ccaatttcatcagctccaatacaagaagttataataaggatggaacctatccaacgtgaa
gatgctatatctaacaattag
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