Solanum dulcamara (climbing nightshade): 129886953
Help
Entry
129886953 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-like
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129886953
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129886953
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129886953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_4
Torus
zf-CCCH_2
zf-CCCH_RBM22
zf-C3HC4
zf-CCCH_DUS3L
zf-CCCH_3
zf-RING_2
zf-CCCH_PARP12
zf-RING_5
RING_XB3-XBAT31
zf-CCCH_9
FANCL_C
IBR_1
Motif
Other DBs
NCBI-GeneID:
129886953
NCBI-ProteinID:
XP_055817837
LinkDB
All DBs
Position
4:complement(22258856..22280007)
Genome browser
AA seq
360 aa
AA seq
DB search
MSKRVLCKFFVNGACLKGEYCEFSHDWKDPPNNVCTYYQKGLCAYGSRCRYKHVIVSERP
SLPSSSAPAQHLLSASPPTTLSPGMLADDAGLLSGISSKYLASGRPFYPPNQPVWSENSE
HRDVADIDNIVEWKRMNPADQSICSFAAAGNCPRGESCPYIHGDLCPICAKHCLHPFRPQ
EREEHIKTCEKRQKRLDLLKHSQEIECSVCLERVLSKTTAAERKFGILFECDHPFCISCI
RNWRSGSPSSGIDINSTFRTCPVCRKLSYFVIPSVTWYSTKEEKQIILESYKAKLRSIDC
KHYDFGNGTCPFGNSCFYKHQYRDGRLEEVVPRLLGHEDGSAVIAKNIRLSDFLGNLRRR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagggttctttgcaagttctttgtaaatggtgcatgtctgaaaggagagtac
tgtgagttctcacatgattggaaagatcctccaaataatgtatgcacatactaccaaaaa
ggattatgtgcctatggcagcaggtgtagatacaaacatgttatagtgtctgaacgacct
tcacttccatcttcgtcagctccagctcaacatctgctctcagcttctcctcccaccacc
ctctctcctggaatgctagcagatgatgcaggacttctgtcaggcatttcttccaagtat
ttggcttcaggaagacctttttaccctcccaaccagcctgtgtggagtgagaattcagag
catcgtgatgtggcagatattgataatattgtcgagtggaagagaatgaatccagctgat
caatcaatttgctcttttgctgctgctggtaattgtccacggggagaaagctgtccttat
attcatggagatttgtgtccaatctgtgcgaagcattgcttacatccttttcggcctcag
gaaagagaggagcatataaaaacatgtgagaagaggcaaaagcgccttgacttactgaag
catagtcaagaaatagagtgcagtgtatgtcttgaacgtgtactctctaagacaactgca
gcagagcggaagttcgggatcctttttgagtgtgatcatccattttgtatatcatgtatc
aggaattggcgcagtggttctccttcctctgggattgatatcaactcgacattcaggacc
tgccccgtatgccggaaactttcatattttgtcattccaagtgtcacttggtactccaca
aaggaagaaaagcaaattatccttgaaagctacaaagccaaactcaggtctattgattgc
aagcattatgactttggcaatgggacttgcccatttggaaatagttgtttctacaagcat
caataccgtgatggccgtctggaggaagtggtaccacgtcttcttggtcatgaagatgga
agcgcagtgattgctaaaaatattaggctctcagacttccttggcaatttaagaagaagg
tga
DBGET
integrated database retrieval system
