KEGG T09577: 129886953

Solanum dulcamara (climbing nightshade): 129886953

Entry

129886953         CDS       T09577

Name

(RefSeq) E3 ubiquitin-protein ligase makorin-like

K15687

E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]

Organism

sdul Solanum dulcamara (climbing nightshade)

Brite

KEGG Orthology (KO) [BR:sdul00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdul04121]
    129886953
Enzymes [BR:sdul01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129886953
Ubiquitin system [BR:sdul04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129886953

SSDB

Motif

Pfam:

zf-CCCH_4 zf_CCCH_4 zf-CCCH Torus zf-CCCH_2 zf-C3HC4 zf-CCCH_3 zf-RING_2 zf-RING_5 RING_XB3-XBAT31 zf-CCCH_9 FANCL_C zf-RING_UBOX IBR_1

Other DBs

NCBI-GeneID:

129886953

NCBI-ProteinID:

XP_055817837

LinkDB

Position

4:complement(22258856..22280007)

AA seq 360 aa
MSKRVLCKFFVNGACLKGEYCEFSHDWKDPPNNVCTYYQKGLCAYGSRCRYKHVIVSERP
SLPSSSAPAQHLLSASPPTTLSPGMLADDAGLLSGISSKYLASGRPFYPPNQPVWSENSE
HRDVADIDNIVEWKRMNPADQSICSFAAAGNCPRGESCPYIHGDLCPICAKHCLHPFRPQ
EREEHIKTCEKRQKRLDLLKHSQEIECSVCLERVLSKTTAAERKFGILFECDHPFCISCI
RNWRSGSPSSGIDINSTFRTCPVCRKLSYFVIPSVTWYSTKEEKQIILESYKAKLRSIDC
KHYDFGNGTCPFGNSCFYKHQYRDGRLEEVVPRLLGHEDGSAVIAKNIRLSDFLGNLRRR

NT seq 1083 nt +upstreamnt +downstreamnt
atgtcgaaaagggttctttgcaagttctttgtaaatggtgcatgtctgaaaggagagtac
tgtgagttctcacatgattggaaagatcctccaaataatgtatgcacatactaccaaaaa
ggattatgtgcctatggcagcaggtgtagatacaaacatgttatagtgtctgaacgacct
tcacttccatcttcgtcagctccagctcaacatctgctctcagcttctcctcccaccacc
ctctctcctggaatgctagcagatgatgcaggacttctgtcaggcatttcttccaagtat
ttggcttcaggaagacctttttaccctcccaaccagcctgtgtggagtgagaattcagag
catcgtgatgtggcagatattgataatattgtcgagtggaagagaatgaatccagctgat
caatcaatttgctcttttgctgctgctggtaattgtccacggggagaaagctgtccttat
attcatggagatttgtgtccaatctgtgcgaagcattgcttacatccttttcggcctcag
gaaagagaggagcatataaaaacatgtgagaagaggcaaaagcgccttgacttactgaag
catagtcaagaaatagagtgcagtgtatgtcttgaacgtgtactctctaagacaactgca
gcagagcggaagttcgggatcctttttgagtgtgatcatccattttgtatatcatgtatc
aggaattggcgcagtggttctccttcctctgggattgatatcaactcgacattcaggacc
tgccccgtatgccggaaactttcatattttgtcattccaagtgtcacttggtactccaca
aaggaagaaaagcaaattatccttgaaagctacaaagccaaactcaggtctattgattgc
aagcattatgactttggcaatgggacttgcccatttggaaatagttgtttctacaagcat
caataccgtgatggccgtctggaggaagtggtaccacgtcttcttggtcatgaagatgga
agcgcagtgattgctaaaaatattaggctctcagacttccttggcaatttaagaagaagg
tga

DBGET integrated database retrieval system