Solanum dulcamara (climbing nightshade): 129886956
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Entry
129886956 CDS
T09577
Name
(RefSeq) telomerase reverse transcriptase isoform X1
KO
K11126
telomerase reverse transcriptase [EC:
2.7.7.49
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdul03032
]
129886956
Enzymes [BR:
sdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
129886956
DNA replication proteins [BR:
sdul03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
129886956
Telomerase complex (fungi)
129886956
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Telomerase_RBD
TERT_C
RVT_1
TEN_TERT
DIKK1-2-4_C-subdom1
Motif
Other DBs
NCBI-GeneID:
129886956
NCBI-ProteinID:
XP_055817840
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Position
4:22361146..22378897
Genome browser
AA seq
1246 aa
AA seq
DB search
MKRRRVPEILWRLFGNRARTLGDTILSLIPLKTSANCQCKGRRCLGCVGENASMSFLLRE
NDPDDYRKLLNQCFIVVSDQAPPLRSYDPHCRWPHLELVRRTIEMTISEQCSSSNVISFD
YDKMRRFSDIVEVLTSPSWSLLLKRIGDVLMVYLLKNTSIFLRLPRNKHHQVAGVPISDL
CLKSHLHICATNYKPSLLHPESWKKRSVDEVYSSARKEMGIRKKREMEKLSTKTTVSAEA
NSACCEVLPCREGQCHSNRHTASCGKRKRQYKWQRQRKHSQLKAQGTHSLIPCMSSNTKD
EWLGDLKCEVEKTNACCSCCLVFEPLSEVKKEILINRRTMFYKLDSCSSVFPSKHILNSL
KPNSSGANKLFKEIFGSLGVNVTTEAAPCVHSSNCNLIASSCLYHSIIKLLKSLIRKAHQ
CQHLRLLEKHCSAPSLDQGTKNIAATTLEGNKSEASILANDCPESGLPCYDFKSESCNTT
SESQSSLVEPTKCYCLKKQVVSFVWATCRSIVPIDLLGTPSNWRILTNNIYNLVKLRRFE
KFMSKQCMRKVKLSSYPLLSDKYSFLLKHKLLERWIFWLFSSFVVPLVQANFYVTEAEHQ
KQDILYYRKQTWENLISKAVTCLRDQGYKELTAASVRKITRTRSFGFSKVRLVPKKRGVR
MLANLKASLKLPMNHPLRPRGRRKVGAGKNVKCHNYKSVNEVLKDLHLVLKHIVAKEPER
LGSSVFDYNDVYKRLLPFLSNLKSGFSVEPGVFIVVSDVERAFDSVDQDKLLSVLDDLNL
EDEYIFSKVVQVVCTKKSLRIPQNWTLGSKENIPGPANVWSCLPTHLLRGILVKQQVKGR
KVRKEQLQNDLKEHIKRNVLQLGIKFFLQSVGIPQGSVLSTLVCSLYYGHLENSVIFPFL
EKTCTRAPGFPSEERFLDDTTARYNHLVACKPKYLLLRLIDDFLFISTSKEQASKFFSRL
QRGFRAYNCNMNEQKFGTNFQMNIIPGLGSDRLYVVEDGTSFLRWSGLFINCSTLEILAD
YTRGRPCCKSGKDPCTFTECPLSTGKIALACCARHFWLSRWSNWYLNSPLSSALTVGWLN
KPGRNLKARLCSYLRPKCHPIFYDSNINSAVVVRLNIYQAFLLCAMKFHCYIYDLSWLYR
FSTKFYADALGKSLRYMKRLIKKRMYSFKTGSDFRPILEVGKGEIEWLGLTAYKQVLKRK
QSRYKELLHVIEAKLKALGNLVESTASVLQQATDIKRSSILWKIKY
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacggagagttccagagattctatggaggttgtttggcaaccgtgcacgtact
ctaggagatacaatcttatctctaattcctctaaaaacatcggcgaattgccaatgcaag
ggtcgccggtgcctcggatgcgttggagaaaatgcctccatgtcgtttcttcttagggaa
aacgatccagatgattatcggaagcttcttaaccagtgcttcattgtcgtctccgatcaa
gcgcctcctcttcgcagctatgatcctcactgccgctggccacatcttgagcttgttaga
aggacaattgaaatgacaataagtgagcagtgcagcagctctaacgttataagttttgat
tatgataagatgagacgctttagtgacatagtagaggttctgacatcaccatcatggagc
cttctccttaaaaggattggggatgttctcatggtttatttactaaagaacacctcaata
tttttgcggctccctcgaaacaaacatcatcaggtggcaggagttccgatcagtgacttg
tgcctaaaatctcacctgcacatatgtgccactaactataagccttcactacttcatcct
gaatcttggaaaaagagaagtgtagacgaagtatactcatcagcgaggaaagaaatgggc
attaggaaaaaacgtgagatggagaaattatctacaaaaactacagtatctgctgaagct
aattccgcttgctgtgaagtgcttccatgtagagaaggacagtgtcactcgaacagacat
actgcatcatgtggaaagcgtaaaagacaatataaatggcagcgtcaaaggaagcatagc
cagttgaaggctcaaggaacacattccttaatcccttgtatgagttccaacactaaggac
gagtggttgggagatctgaagtgtgaagttgaaaagacaaatgcttgctgctcttgttgt
ttggtctttgaacctctgtcagaggtcaaaaaggaaattctaatcaacaggcgaaccatg
ttctacaagttggatagttgttcgtcagtattcccatccaagcacatcctgaattccttg
aagccaaactcttctggagcaaataaactcttcaaggaaatttttggatcccttggtgtt
aatgtcactactgaggcagctccttgcgtgcatagcagcaactgtaatctcatcgcatcc
tcgtgtctataccattcaattattaagttgctgaaatctctcatccgcaaagctcaccag
tgccaacacttaaggctgttggaaaaacactgttctgctccatcattggaccaaggcacc
aaaaatattgctgcaactaccttggagggaaacaaatctgaggcaagtatacttgcaaat
gattgtccggaaagtggattgccatgctatgacttcaagtctgaaagttgcaatacaact
tcagaatcacaatcctctcttgtggagccaaccaagtgttattgtctgaagaagcaagtt
gtatcatttgtttgggctacttgtcgaagtatagtgcccatagatttgctggggactcct
tctaattggagaattctaacgaataatatttacaatcttgttaagctacgaaggtttgag
aaattcatgtccaagcagtgcatgaggaaagttaaactatctagttatcctctactatca
gataagtactcctttttattgaaacataaattacttgaacgctggatattttggttgttt
tcttcttttgttgtgccactggttcaagccaacttttatgtaactgaagctgagcatcag
aaacaagatatattatattatcgcaagcagacctgggagaatcttatttccaaagctgtg
acttgcttaagggatcaaggttataaagaattaactgctgcatctgtcaggaaaataaca
aggactaggtcatttggcttctcaaaagttcgactagttccaaaaaaaaggggggtaaga
atgcttgcaaatcttaaagcatccctaaagttgcctatgaatcatcctctgcgacccaga
ggtcggagaaaagtaggcgctggtaaaaatgtcaaatgtcacaattacaagtctgttaat
gaagtcctcaaagatttgcatttagtgctcaaacatatagtagcaaaagaaccagagagg
ttgggttcatctgtatttgactacaacgatgtgtataaaaggcttctccctttcttatca
aatctgaagagtggtttttctgttgaacctggagtattcatcgttgtatcagatgttgaa
agagcttttgactctgtagaccaagataagctactaagcgtgttggatgatctcaatttg
gaggatgaatatattttcagcaaagttgttcaagttgtgtgcactaagaagtcactgcgg
attccacaaaactggacattagggagtaaagagaatatccctggtcctgccaatgtctgg
tcttgtcttcccactcacttgttgcgtggcattcttgtaaagcaacaggtgaaaggcaga
aaagtaagaaaagaacagcttcaaaatgatttgaaggagcacataaagcgcaatgtgctg
cagttaggtatcaagtttttcttgcaatctgttggtatacctcaaggaagtgttttgtcc
actctggtctgctcgttgtattacgggcatcttgagaactcagtaatatttccatttctc
gagaaaacttgtacacgtgcccctggatttccttctgaggaacgtttccttgatgataca
actgcaagatataatcatctagtggcgtgtaaacctaagtatctattgcttaggcttatt
gatgactttcttttcatctcaacctcaaaggaacaggcttctaagttcttctcccggttg
cagagagggtttcgtgcctataactgcaacatgaatgaacaaaaatttggaacgaacttt
cagatgaatattattccaggtttgggatcggatagattatatgtggttgaagatggaacc
tcatttcttcgatggagtggactatttatcaactgctcaaccttggaaattctggcagat
tacacgagaggtcggccttgctgtaaatctgggaaagatccatgtacatttactgagtgt
ccactttccacaggaaagattgccttggcttgttgtgcaaggcatttctggctttcaaga
tggtctaattggtacttgaattccccgctaagttcagccctcactgttggctggctaaat
aaaccaggacgtaacttgaaggctaggttgtgcagttaccttaggccaaaatgccatcct
atattctatgattctaacataaactcagcagttgtggtcagactcaacatttatcaagct
tttcttctctgtgccatgaagtttcactgctacatctatgatttatcatggttgtataga
ttcagcaccaaattttatgcagatgctctgggaaaatcattgaggtatatgaaaaggctc
atcaagaagaggatgtattccttcaaaactggttcagattttcgtccaattcttgaagtg
gggaaaggggaaatcgaatggcttggattaactgcttataaacaagtgttgaagagaaaa
cagtcaaggtataaggagttgttacatgtaatagaggctaagctcaaagcacttggtaac
ctagtagaaagtacagcctcagtattgcaacaagccacagatattaagcgttcctccata
ctatggaagattaagtattga
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