Solanum dulcamara (climbing nightshade): 129887036
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Entry
129887036 CDS
T09577
Name
(RefSeq) protein CHROMATIN REMODELING 24 isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129887036
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
129887036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
HDA2-3
Motif
Other DBs
NCBI-GeneID:
129887036
NCBI-ProteinID:
XP_055817951
LinkDB
All DBs
Position
4:complement(24095840..24110941)
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AA seq
1236 aa
AA seq
DB search
MSKPQQHQPRSLNQRHNQILINLSASHSKPPPDDMTKLEARRCFNQNDGLPTFSFTTDSD
SSPSPVRFSSNGIGNDAVPSFSGIADFSPDSATYSPSGEVEEIDDESKINNISEFENDAV
PNFSDIADFSPDYAKSSPLGEKEIDEYKHEIQEELSDQTEDSFDYQSSGAGEKEIDEPKK
GIQEELNNPPENSFDSHCSEISYLDSSSYSEEKEIDQPTSGTKEDPLLSKIDDNSSSLSV
DMEQFKDVRENSKLSQEGQKDYEKTSNEGGEKIMKVKIKGRRRLCKISEDNNDSEEMKLK
DNEESGFLEITDFDSPPPQVKNAVQNEHSSCGNEIRDILNDLSSRLEILSIEKKRAPKPR
DLTKNEILEYQSAGSSFSLSSGSSSDSTKESRIGGEIHKECFNEIDSGDEIKNDCVVRKF
NDTRSYVGAPKRKEVKQVVGKSQPMKNSISAYKFLEEGDTNDSDGDCVVVGDKSAVTQVG
RHNRKVRHERKCSDDLDSHDFVSEEDHTYTLSGPKFNYGLPGKIAKMLYPHQREGLKWLW
SLHCLGKGGILGDDMGLGKTMQICGYLAGLFYSKLIRRVLIVAPKTLLPHWIKELTAVGL
SQKIREYFATSAKLRNYELQYVLQDKGILLTTYDIVRNNVKSLCGDQYYEDRDGELTWDY
MILDEGHLIKNPSTQRAKSLHEIPCAHRIIISGTPLQNNLKELWALFNFCCPGLLGDKQW
FKEKYEHLILRGNDKNAYDRDKRIGSAVAKELREHIQPYFLRRLKSEVFSDDSSTSTKLS
KKNEIIVWLKLTNCQRQLYTAFLKSEIVLSAFDRSPLAALTILKKICDHPLLLTKRAAEE
VLEEMDSTSNQDDRAVAEKLVMQMANVTEKLDEEVSHDVSCKITFILALLDKLIPGGHNV
LIFSQTRKMLNHLQDALISNGFQFMRIDGTTKATDRLKIVNDFQEGPGAPIFLLTSQVGG
LGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVVVYRLMTCGTVEEKIYRKQVY
KGGLFKTATEHKEQIRYFSQQDLRELFSLPKDGGFDISNTQKQLNEEHDHEHKMEETLKA
HVKFLETLGIAGVSSHSLLFSKTAPVQAVQDEDEVKIARERMTYAGNSSSHSSVERAVDA
SQYAFKPKDVKLQEKKSVPTRVGPTEADIKDRIRRVYLLLAKKDMISKLSDKGQNLQRQL
AELHKELEIIEMEKENKDEIIDLDDISGQFHRTVNV
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaccccagcagcatcaacctcgaagccttaatcaacgacataatcagattctc
ataaacctttccgcttcccattctaaaccccctcctgatgatatgacaaaattggaagct
agacgatgtttcaatcagaatgatggccttcccactttctcttttaccactgattccgat
tcttctccttctcccgttcgattttcttcaaatggtataggaaacgacgccgttcctagt
ttctctgggattgctgatttcagtcctgattctgctacatattcgccttctggagaggta
gaagagattgatgatgaatcgaagattaacaatattagtgaatttgagaacgacgccgtt
cctaatttctcagacattgctgattttagtccagattatgctaaatcttctcctttaggg
gaaaaggagattgatgaatacaagcatgaaattcaagaggaattaagtgaccaaaccgag
gattctttcgattatcagagttctggagccggggaaaaggagattgatgaacccaagaaa
ggaattcaagaggaattaaataacccacctgagaattcttttgattctcactgctctgag
atcagttatcttgatagctcatcttattctgaggaaaaggagattgatcaaccaacgagt
ggaaccaaagaggacccactattatctaaaattgatgataacagttcttccctatctgtg
gatatggaacagttcaaagatgtgcgtgaaaactctaaactctctcaggaaggccagaag
gattacgagaaaacatcaaatgaaggaggggagaaaataatgaaggtgaagatcaaaggt
cgtcgccgcctttgtaaaatttcagaggataacaatgacagtgaggaaatgaagctaaag
gataatgaagagtccggatttctcgagataacagattttgattcacctcctccccaggtg
aaaaatgcagttcagaatgaacacagtagttgtgggaacgaaataagggatatcctgaat
gatttaagttcaagacttgagattttgtccattgagaaaaagagggcaccgaagccccgt
gatttgactaagaatgaaattctggaataccaaagtgctggttcctccttttcactttct
tctggttcctcatctgattcaaccaaggaatctaggattggaggagaaattcacaaggag
tgttttaacgagatcgattcaggggatgaaattaagaacgactgtgtcgtccggaagttc
aatgatacaagatcttatgttggagcaccaaagaggaaagaagttaagcaggtggttgga
aaatcacagcccatgaagaactctatttctgcctacaaatttctggaagaaggagatact
aatgacagtgatggtgattgtgtggttgttggtgacaagagtgctgtcactcaagtggga
agacataacaggaaggttagacatgagcgtaaatgttcagatgacttggattcacatgat
tttgtttcagaggaggatcacacttacacactcagtggaccaaagtttaattatgggtta
cctggtaaaattgccaaaatgttgtatcctcaccaacgtgagggtttgaagtggctttgg
tctcttcactgtctgggtaagggtggtattttaggcgatgacatgggtttggggaagacc
atgcagatatgtggctacttagctggattgttttattcaaagttgataaggagagtgttg
attgttgctcccaaaactttgttgccccattggatcaaggaattaactgctgtagggctt
tctcagaaaataagggaatattttgcgacgagtgcgaaactccgaaattatgagcttcaa
tacgttcttcaggacaaaggtattctcctcacaacatacgacattgtaagaaataatgtg
aagtccttatgtggtgatcagtattacgaagacagagatggggagttgacatgggattat
atgattcttgatgaggggcatctcataaagaatcccagtacacagagggctaaaagtttg
catgagattccttgtgcacatcgtatcataataagtggaacgcctcttcaaaacaaccta
aaggagttatgggctctatttaacttctgctgccctgggctgctgggcgacaaacaatgg
ttcaaagagaaatatgagcatctcattcttcgtggaaatgataaaaatgcttatgacaga
gacaagcgtattggctcagcagttgcaaaggaattgagggaacacattcagccatatttt
ctgcgacgtctcaagagtgaggtattttctgatgattcctctaccagcacaaaactttcc
aagaaaaatgagatcattgtgtggcttaaattgacaaattgtcagcggcaactctacact
gctttcttgaagagtgagattgtcctgtcagcctttgataggtccccactggctgcactt
actatcttaaagaaaatatgtgaccatccactactactaacaaagagggcagcggaagaa
gttcttgaagagatggattcaacatcaaaccaggatgaccgtgctgtggcagagaaattg
gttatgcaaatggcaaatgtcactgagaaacttgacgaggaagtatcacatgatgtttcc
tgcaagataacatttatactggctttgttggacaagttaattcccggtgggcacaatgtg
cttatcttttctcaaacacgcaagatgcttaatcacctccaagatgctttaatatccaat
ggtttccagttcatgaggatagatggaaccaccaaagccactgatagactgaagattgtt
aatgatttccaagagggtcccggtgctccaatatttcttttaacttctcaagttggcggt
ctaggtcttacactcactagagcagatcgagtgattgttgttgatccagcatggaatcca
agcacggataatcaaagtgttgaccgcgcctacagaattgggcagacgaaggatgttgtt
gtttatagattgatgacttgtggcacagttgaagagaagatttataggaagcaggtatac
aaagggggattgttcaaaacagcaactgagcacaaagaacaaatccgttatttcagtcaa
caggatcttagggaactcttcagccttcctaaagatggtggctttgacatatcaaatact
caaaaacagttgaatgaagagcatgatcatgagcacaaaatggaagagactttgaaggcc
catgtaaagtttttggagactctgggtatagcaggagttagcagccatagtctgcttttc
tcaaagacagcgcctgtgcaagctgtccaagatgaggacgaagtgaaaattgcacgagag
aggatgacatacgctgggaactcatcatcgcactcatcagttgaacgtgctgttgatgcg
agtcagtatgcttttaagccaaaggacgtgaaattacaggaaaagaagtctgtacctact
agagttggtcctacagaagctgatatcaaggacagaatcaggcgggtttatctactttta
gcgaagaaggatatgatttccaagttatctgataaagggcagaacttacaaagacaactt
gctgaactgcataaggagctggagattattgaaatggaaaaggaaaacaaggatgaaatt
attgacttagatgacatctctggacaattccacaggactgtaaatgtgtaa
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