Solanum dulcamara (climbing nightshade): 129887038
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Entry
129887038 CDS
T09577
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129887038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129887038
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129887038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
TIP49
AAA_2
RNA_helicase
AAA_28
nSTAND3
AAA_33
AAA_17
NPHP3_N
Bac_DnaA
IstB_IS21
AAA_18
Rad17
Mg_chelatase
Viral_helicase1
ATPase_2
Parvo_NS1
AAA_3
NACHT
NB-ARC
Nucleolin_bd
TsaE
Cytidylate_kin2
AAA_19
Vps4_C
AAA_7
ABC_tran
AAA_11
CPT
Motif
Other DBs
NCBI-GeneID:
129887038
NCBI-ProteinID:
XP_055817955
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All DBs
Position
4:complement(24163305..24169960)
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AA seq
818 aa
AA seq
DB search
MGRGGRGSGGGGRRSLSSSFDRELRGHIESCKNNYLSVEDLVNHLRSSYHKYSREKLLPF
TKRVQDVLQFQTSNPNSIEEVTPPKKKPKRDSSEQRLQLLEKKHIVNSQKKKQEGDGSSS
TTLASTSDSDDSYSSSSSDAIYGEKLEEKPDLMKSMLRHTYNQQVNNTPQSKKIEYEMVH
DNNNEKRKNDMSKGGQRRNRATRDLGGGGREGERFGDSDGNVDGPRFKDLGGMDGVLEEL
KMEVIVPLYHPQLTKHLGVRPMSGILLHGPPGCGKTKLAHAIANETRVPFYKLSATELVS
GVSGASEENIRELFSKAYRTAPSIVFIDEIDAIAAKRENLQREMERRIVTQLMTCMDESH
RLVKPDEAEGTALPTDKRNSEAKSDGSNGGPGYVLVIGATNRPDAIDPALRRPGRFDREI
ALGIPDENARVQILSVLTRNLRVEGAFDLMKIASSTPGFVGADLAALTNKAGNLAMKRII
DVRKAELSRELSDGEDTEEWWRKPWSPEEMEKLSIFMADFEEAAKLVQPSSRREGFSAIP
NVKWEDVGGLDSLRHDFDRYIVRRIKNPKDYMGFGVDLETGFLLYGPPGCGKTLIAKAVA
NEAGANFIHIKGPEILNKYVGESELTIRTLFTRARTCAPCILFFDEMDALTTKRGKEGGW
VVERLLNQLLIELDGADQRKGVYVIGATNRPEVMDQAILRPGRLGRLLYVPLPSPDERVL
ILKALARKKPIDSSVDLMTIGRDDACKNFSGADLAALMNEAAMVALEDKLTAMATSCGDT
SSIIKESHFKRALEKVSPSVSDEQIKYYQKLSKDFRAA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggggaggacgcggcagcggtggtggtggaaggaggtcactttcgtcgtcgttc
gatcgagagcttcgcggccacattgagtcctgtaagaacaattatctatccgttgaagat
ctcgtcaaccacctccgttcatcttatcacaagtattcccgcgaaaagttactgccgttt
actaaacgggtccaagatgttctacagttccagacctctaaccctaactcaattgaagaa
gtaacgcctccgaaaaagaagccaaaaagagacagcagcgagcagcgtttgcagctcctt
gagaagaaacacatagtgaatagccaaaaaaaaaagcaggaaggggacggttcgtcgtca
acgactctcgccagtacctccgatagtgatgattcttactcttcttcgtcttccgatgct
atttacggagagaaattggaagaaaagcccgatttaatgaagtctatgcttcggcatacc
tacaatcaacaggtgaataatactccccagtcaaaaaagattgaatacgagatggttcat
gacaataataatgaaaaaaggaagaatgatatgtctaaaggaggacaacgaagaaacaga
gccactagggatttaggaggaggaggacgagagggggaaaggtttggggatagtgatggg
aatgttgatgggccaaggtttaaggatttaggaggaatggatggagtgttggaggaattg
aaaatggaggtgattgttccattgtaccatcctcagctgactaagcatcttggagttagg
cctatgtcagggatactcttacacggcccaccaggctgtggtaaaacaaagctagctcat
gctatcgccaatgagactcgagttccattctacaaactttctgctactgagttggtctct
ggagtttcaggtgcatcagaagagaacataagggaactgttctcaaaagcataccggaca
gcaccttctattgtgtttattgatgagattgatgcaattgctgccaaaagagaaaattta
cagagagaaatggagcggcgtattgtaacacagctgatgacgtgcatggatgagtcacat
agacttgtaaaacctgatgaagcagagggaactgctctacccactgataaaagaaatagt
gaagcaaaatcagatggatctaatggtggacctggctatgtcctagtaattggggccaca
aatagacctgacgctattgacccagcattgaggaggcctggacgatttgaccgtgaaatc
gccttgggtattccagatgaaaatgctagggtgcaaattttgtctgtgcttactcgtaac
ctaagagttgaaggtgcgtttgatctcatgaagatagctagctcaaccccaggatttgtt
ggagcagacttggctgctctaactaacaaggcaggtaacttggcaatgaagaggataata
gacgtgaggaaggctgagctttcaagagaattgtcagatggtgaggataccgaagaatgg
tggagaaagccatggtcacctgaagagatggaaaagctcagcatttttatggctgatttt
gaggaagcagctaaattggttcaaccttcatctagaagagaaggtttctccgctatccca
aatgtaaagtgggaagatgttggaggccttgattcgttaagacatgactttgaccgttac
attgtcaggcgtataaagaatcctaaagattacatgggttttggagtggacttggaaaca
ggattcttgctttatggccccccaggatgcggtaaaacattaattgccaaggctgttgct
aatgaagctggagcaaattttatacacattaagggacctgaaattttgaacaagtatgtt
ggtgaaagtgagctaactattcggacattatttacccgtgcaaggacatgtgctccatgc
attctattcttcgatgagatggatgccttgacaactaagcgtggtaaggaaggaggttgg
gtcgttgaaaggcttttgaatcagctactaatagaactagatggtgccgatcagcgaaaa
ggtgtttatgtgattggtgccacaaataggcctgaagtcatggaccaagctattcttcga
cctggaaggctagggagactcctatatgtccctctacctagtccagatgagcgtgtacta
attttaaaagctcttgcccggaaaaaacctatagattctagtgtcgacttgatgaccatt
ggaagagatgatgcctgcaaaaattttagtggagcagacctagcagcactgatgaatgaa
gctgcaatggttgcacttgaagataaattgacagccatggccacaagttgtggtgacaca
tcatcgattattaaggagtcacatttcaaacgcgctctggaaaaagtttctccatctgtc
tccgacgagcaaataaaatactatcagaaattatcaaaagacttcagagcagcatga
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