Solanum dulcamara (climbing nightshade): 129887043
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Entry
129887043 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129887043
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129887043
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129887043
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129887043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
129887043
NCBI-ProteinID:
XP_055817962
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Position
4:complement(24262258..24269364)
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AA seq
880 aa
AA seq
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MDDSCAVCAETLEWVAYGACGHKDVCSTCVARLRFICDDRRCCICKTEANVVFVTKALGD
YTNMISDFSVFPSEPKEGRSGSYWYHEDTQAFFDDLDHYKMIWAMCRLSCSVCDNMEGMA
GDGVKRRERFRNIDQLKGHLFHKHKLIMCGLCLEGRKIFICEQKLYTRAQLNQHIHTGDS
EVDGTESERGGFMGHPLCEFCRTPFYGDNELYSHMSTEHYTCHMCQRQHPGQYEYYKNYD
DLEIHFRRDHFLCEDESCLAKKFVVFQSESELKRHNTLEHGGRMSRSQRSAALQIPTSFR
YRRSSEQVNRRGRGQSFRRDNAESELSMAIQASLETAANADGRLHDTSSNRRVVSDQTVT
DDDDLLLQPFESLTTDSEPASRYLQAVSQISRNSQLEESSFPPLAVPPANSQPRPQSDAL
PKNTMASHLRRKQNKSTKLPSSSPAWPATTGHSPPVIGHQRAWSVISSTSGSSSNSRHSK
AAADKPSAPVVTSQQAWPAVNSAFGSASGSSQIKPSTAADGPPSSSYLNSVAARSSLAHE
SSSSSVGSSRSQAHSNRISHSSSAPSLVQSGSYDSSTSDFPPVSAVQTRKLPASGQQAAT
NVEDVQTANKSLVERMHIALEFDQDKFTAFKDISAEYRQGLMDAETYLAYAAQFGLSHLV
LELARLCPDAERQKALIDTYNANLVGTVSIQNRQSGGNRLKDSKSSKNGKGKSIDTGNVT
SKDNMADNILSTVRKLQSSHKIPEDDVEVLSRDGYRSAKGKSKLSLNESEEELNSRGKPL
KLDARQNDSSAKDESNHRSGNNDGKGKQRKKTSKFHRVRLGDGSVETLLNLNSSNPDLDP
DPDRETSDEQSNPESLPVRGVWRNGGGQKLVAMTSKGPKK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgcgcggtctgcgctgaaacccttgaatgggttgcctatggagcttgc
ggtcacaaggatgtttgctcaacctgtgttgctcgtcttcgattcatctgtgatgatcgc
cgatgttgtatttgcaaaaccgaggctaacgttgtctttgtcaccaaggctctaggagat
tatacgaatatgattagtgacttttcggtatttccatctgaaccaaaagaaggccggagt
ggttcttattggtatcatgaggacacacaggctttctttgatgatttagaccattacaag
atgatctgggctatgtgcaggctttcttgtagtgtgtgtgataatatggaggggatggct
ggtgatggcgtgaagagaagagaaaggttcagaaatattgatcagttgaaaggtcactta
ttccacaagcacaagttgatcatgtgcggcttatgtttggagggaagaaagatatttatc
tgtgagcagaaactgtacacaagggcacagctgaatcagcatatacacacaggtgactct
gaggttgatggtactgaaagtgaaagaggtggattcatgggtcatcctctttgtgaattc
tgtaggaccccattttatggggataatgagctgtattctcatatgtcgactgaacattat
acttgtcacatgtgccaaaggcagcaccctgggcaatacgaatactacaagaattatgat
gacctagagatccacttccgcagagatcatttcttatgtgaagatgagagttgtcttgca
aaaaagtttgttgttttccaatcggaatctgagttgaagaggcacaatactcttgagcat
ggaggtcgtatgtcgcgttcccaacgcagtgctgccttgcagataccaacaagttttcga
tatcgccgtagtagtgaacaggttaatcgtcgtggaaggggacaatcatttaggcgtgat
aacgctgagagtgaactctccatggccattcaagccagtttagagactgccgctaatgca
gatggaagactgcatgatacatcaagcaataggagggtagtttctgatcaaacggtaaca
gatgatgatgatctcctccttcaaccctttgaatctttgactactgattctgagccagct
tcaagatatcttcaagctgtgtcacaaatttccagaaattctcagcttgaagagtcttca
tttcctccccttgctgtgcctcctgctaatagtcaaccaagacctcagtctgatgcttta
cccaagaacactatggcatcacatctacgccggaagcaaaacaaaagtacaaagcttcct
agttcatctcctgcatggccagcaacaaccggtcactcaccaccggtaattggtcatcag
cgcgcctggtctgtgataagtagtacttctggatcatcatctaattccaggcatagtaag
gcagcagcggataaaccctctgcaccagtagttaccagtcaacaagcttggcctgctgtt
aatagcgcttttggatcagcatcaggctctagccaaattaaaccatcaacagctgcagat
ggacctccgtcatctagttatttaaactctgttgccgctcgatcttcattagcgcatgaa
tcatcttccagctctgttggttcatcaaggagtcaggcccacagcaatcgaattagccat
tcctcgtcagccccaagccttgttcagagtgggtcttatgactcttctacctctgatttt
cctccagtttctgctgtgcagactcgcaaacttcctgcaagtggccagcaggcagccaca
aatgtggaagatgttcaaactgcaaataaatctttggtagaaagaatgcatattgctcta
gaatttgatcaagacaaattcactgcatttaaggacatctccgcagaatatcgccaaggt
ttaatggatgctgagacatatctggcatacgctgcacagtttggcttgtcacatctggtt
cttgagttggctagactatgccctgatgctgagaggcaaaaagcattaattgacacctac
aatgctaatttagttggcactgtctctatacagaatcgccaaagtggtggcaatcgcttg
aaagatagtaaaagttctaagaatggtaaaggcaagtcaattgatactggaaatgtcact
tcaaaggataacatggcagataacattttaagtactgtaaggaaattgcagtctagccat
aagattcccgaagatgatgtagaagtgttgtcaagagatggttatcggtctgctaaaggt
aaatcaaaattaagtctgaatgaatctgaggaagaattgaactcccgaggcaagccttta
aagctggatgcccgccagaatgactcgtctgctaaagatgaatcaaatcacaggtcgggg
aataatgatgggaaaggcaagcagcggaagaaaacctcaaagtttcacagagttcgctta
ggtgatggatctgttgaaacacttttaaatctcaatagttcaaaccctgatctggatccc
gacccagatcgagagacatcagatgagcaaagtaaccctgaaagtttgcctgtgcgtggt
gtttggcgaaatggaggaggtcaaaagcttgtagctatgacttcaaaaggtccgaaaaag
tga
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