Solanum dulcamara (climbing nightshade): 129887079
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Entry
129887079 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129887079 isoform X1
KO
K24737
WD repeat-containing protein 6
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdul04990
]
129887079
Domain-containing proteins not elsewhere classified [BR:
sdul04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
129887079
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
129887079
NCBI-ProteinID:
XP_055818009
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All DBs
Position
4:complement(24970923..24989614)
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AA seq
1386 aa
AA seq
DB search
MAEQSRCCLQRGQYLGEISALCFLHLPPDFSSLPFLLAGTGSQILVYDLTIGKLIRSFDV
FDGIRVHGVSLQAFNEDLSDSHVTFKIAVYGERRVKLFSLQIIRVSNSQIEQQACFDLTL
SLVLLLPKFTHWVLDVSFLKWDGATSSNNGSDCLAIGCSDNSVHIWDMLRCSLLSTVRCS
ERCLLYSMRIWGNDVGSLYVASGTIFNEVLVWKVGRKAGPDVIGNPTKDPLNLTSYKDLH
LPYQQYEAINICKLTGHEGSIFRLAWSADGLKLVSVSDDRSARIWTLGADGPNHIVDDSV
LFGHSARIWDCCIFDSLIITAGEDCTCRVWGMDGTLLARIKEHVGRGIWRCLYDPDAALL
VTAGFDSSIKVHRLQASFSNGSVGGIVEVQDSTVQKEEFALYIPNFREHVGLMNSKSEYV
RCLHFSREDSLYVATNNGYLYHAKLYDAKDVKWTKLLHIGEEGPIVCMDLLSCYSNVTKD
VETWVAVGNGKGTMMIANVVGDVLNPRVELTSTWSAEPERQLLGTFWCKSLGPMFLFTSD
PRGTLKLWRLFNPLPSVSHDVMRRCCVSLIAEFLSCFGMRIMCLDASIENEVLVCGDIRG
NLLLFPLQRDILFSMSAASEINITPLNNFRGAHGISTVCSISIASFSPTQLEIHSTGGDG
CICYFEHDRSRHDLEFVGIKQVKELSTIRSAFTNADQQDDLPSGSCAIGFSSSDFIIWNL
ISETKVLQVTCGGWRRPHSYFLGDVPEMKNCLAYVKDGIIYVHRHWVTTNERVMYPKKIH
LQFHGREIHTLCFISRDSSCSPNEKQDTSSEMIWVATGCEDGTVRLTRYASETENWSTSK
LLGEHVGGSAVRSIFFVSKLHRMVLDANDMPESVNSEKWFLEDPEDCSLLISVGAKRVVT
AWKQKSKMRIREGTLDTECNIKNDLHFHGLLSSASFQWISTDMPTRERNHGKQQIKKVSG
TVENGGSFSSEDKRSYSETCVPDIFENDWRYLAVTAFLVQVAGTRCSVCFVVVACSDATV
TLRALLLPYRLWFDVALLTPLSSPVLALRHIVVPTCPPVQGNIQFGSRYIIISGSTDGSI
TFWDLTDHVENFMRQLSALQIGKVLDSQKRPRTGRGSQGGRQWRLLASKVSNKTTSDEQL
SEFPVSKGKPDNGCCATTVAGTDKNVQHHALQGISHSVENTHVFSPDTSTSIKEVLQKAC
PLHVFKDVHQSGVNCLHVSDIDGPEASDHRFKFYVLSGGDDQSLNCLRLDFSLTSMRHSS
EKSTLEQNSTSTSQNVGGDVHNYQVGNHDIKFKLHDKIASAHSSAVKGVWTDGRWVFSTG
LDQRIRCWHLEQRGKLTEHKHMVVSVPEPEALDARACGRNHYQIAVAGRGMQMFDFAAPD
DMKGGN
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaaagccgttgttgcctccagagagggcagtaccttggcgaaatatctgcc
ctctgctttctacaccttcctccggacttctcttcacttccttttcttctagctggaact
ggttcacaaattctcgtctatgatttgacgattgggaaattgataagatcatttgatgtc
ttcgacggaattcgtgtgcatggagtttctttgcaggcatttaatgaagacttatcggat
tcacatgttacttttaagattgcagtctatggtgagaggagagttaaacttttcagcttg
caaattataagggtttctaactctcaaattgagcaacaagcatgtttcgatttaacttta
agtctcgtcctcctgctacctaagtttacgcattgggttttggatgttagctttttgaag
tgggatggcgctacttcttcaaacaatggtagtgattgtcttgctataggatgcagtgac
aattctgtacatatctgggatatgttgaggtgttctctgctttccacagtaagatgctca
gaaaggtgtttgttgtactccatgaggatttggggcaatgatgttggatctctctacgtg
gcatctggtacaatctttaatgaggttcttgtttggaaagtgggccgtaaagctggtcct
gatgttattggaaatcctaccaaagaccctttgaatttgaccagttacaaggatctccat
cttccttatcagcaatatgaagccataaatatatgtaaattaactggacatgaaggttca
attttccgccttgcatggtcagctgatggacttaaactagtatctgtatctgatgatcgc
agtgctcgtatctggacacttggtgctgatggtcccaaccacatcgttgacgactcagtc
ttatttggtcacagtgctaggatttgggactgctgtatatttgactctttaatcataact
gctggcgaggattgcacatgtcgtgtgtggggaatggatggcacactacttgcaagaatc
aaagagcatgttgggagagggatctggcgctgtctctatgatcctgatgcggcactcctt
gtgactgcggggtttgattcttcaataaaagtacaccggctgcaagcatcgttttctaat
ggatcagtaggaggtattgtggaagtacaagactcaactgtccaaaaggaggaatttgct
ctttatattccaaattttagagagcatgttggcctcatgaacagcaaaagtgaatatgta
agatgcttgcatttttctcgggaggattctctttatgttgccacaaacaatggatatctg
taccatgcaaaactatatgacgccaaggatgtgaaatggactaaacttcttcatattggg
gaggaaggaccaatagtttgcatggatttgttgtcatgctattctaatgttactaaagat
gtcgaaacttgggtagctgttggcaatggtaaaggcactatgatgattgccaatgttgtt
ggtgatgtcttgaatcctagagttgaactcacttctacatggtcagctgaaccagagagg
caactacttggaactttttggtgcaaatctttgggaccaatgttcctcttcacttctgat
cctagaggcacattgaaattatggaggctgttcaaccctttgccctctgtttctcacgat
gtcatgagaaggtgttgtgtatctttaatagcagaattcctctcatgctttgggatgcga
ataatgtgcttggatgcatcaatagagaatgaggttctagtgtgcggtgacattcgtggt
aatcttttgttatttccattgcaaagagacattctatttagcatgtctgcagcttcggaa
ataaatataactcccctcaacaacttcagaggagctcatggaatatcaactgtgtgtagc
atctccattgctagttttagtcctacacaacttgaaattcattcgactggaggagatggg
tgcatatgctactttgaacatgatagaagtcgtcatgacttggaattcgtagggatcaag
caagtgaaagagctaagtacaatacgatcagccttcactaatgctgaccaacaagatgat
ttacctagcgggagctgtgcgataggattttcttcatcagattttatcatatggaattta
atatctgagacaaaggttttgcaagtaacttgtggtggatggaggcgccctcattcttat
tttcttggtgatgtaccagaaatgaaaaattgccttgcatatgtcaaggatggaatcatt
tatgttcatagacactgggtgaccactaatgagagggtgatgtatcccaaaaaaattcat
ctgcaattccatggcagggagatacataccttatgttttatctctcgagattcatcgtgc
agtccaaatgaaaaacaggatacttcttctgagatgatttgggttgcaacaggttgtgaa
gatgggactgtgagattgacaaggtatgcttcagaaactgaaaattggtcaacttccaag
ctgcttggtgaacatgttggtggatcagctgtgagatctatattctttgtctcaaagcta
catagaatggtgctggatgcaaatgacatgcctgagagcgttaacagtgaaaaatggttc
ttagaggacccagaggattgttctttactaatatcagtaggtgcaaaaagggtagtaact
gcttggaaacaaaaaagtaagatgagaataagggaaggaacccttgacacagagtgcaat
attaaaaatgatttacattttcatggtttattatcatctgcatctttccagtggatttct
actgatatgccaaccagagaaagaaatcatggaaaacaacaaatcaaaaaagttagtgga
acagtcgaaaatggcggatcattttcctcagaagacaagagaagctattcagaaacatgc
gttccagatatatttgaaaatgattggagatatctcgcagttactgcttttcttgttcag
gttgcaggcaccaggtgttcagtctgtttcgtagttgttgcatgttcagacgccacagtt
acactacgagctcttttattaccctatcgactttggtttgatgttgctttgttgactcct
ttgtcatctccagtgcttgctttgcgacatatcgttgttcctacatgtccccctgttcaa
ggcaatattcaatttggaagtcggtatattattattagcggatctactgatggaagtatt
accttttgggatcttaccgatcatgttgaaaattttatgcggcaattatcagcacttcaa
atcggaaaagttctagacagtcagaaaaggccacgtacgggtagaggaagccaaggtgga
cgacagtggagattgttggccagtaaagtttctaataaaacaacaagtgatgaacaattg
tcggaatttcctgtttcaaagggaaagccggataatggttgttgtgcaacaactgtcgca
ggaaccgacaaaaatgtgcaacatcatgctttgcaagggatttcccattcggtagaaaac
acacatgtattttctccagacacctccactagcattaaggaagtattacagaaagcatgt
cccttgcatgtcttcaaagatgttcaccaatcaggggttaactgtcttcatgtttcagac
atagatggtcctgaagcttctgatcataggtttaaattttatgttctgagtgggggtgat
gaccagtcacttaactgtcttagattagatttctctctgacatcaatgaggcatagttct
gaaaagtcaactttggagcaaaatagcaccagcacatcacagaatgtaggtggtgatgtt
cataattatcaagtgggaaatcatgatattaaatttaagttgcatgataaaatcgcttca
gctcacagctctgcagtcaaaggtgtttggacagatggtcgttgggtattttctactggt
cttgatcagcgcatcaggtgttggcatctcgaacagcgaggcaaattaactgagcacaaa
catatggttgttagtgtaccggagcctgaggcattggatgctagggcctgtggaaggaac
cattatcagattgcagtcgctgggaggggaatgcagatgtttgatttcgctgcacctgat
gacatgaagggtggaaattaa
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