KEGG   Solanum dulcamara (climbing nightshade): 129887083
Entry
129887083         CDS       T09577                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03010  Ribosome
sdul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    129887083
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129887083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sdul03011]
    129887083
   04121 Ubiquitin system [BR:sdul04121]
    129887083
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdul04147]
    129887083
Ribosome [BR:sdul03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    129887083
  Archaea
    129887083
Ubiquitin system [BR:sdul04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   129887083
Exosome [BR:sdul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129887083
  Exosomal proteins of colorectal cancer cells
   129887083
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD DUF2604 Fer2_3 UBL_UBAC1 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 129887083
NCBI-ProteinID: XP_055818013
LinkDB
Position
4:25030957..25031658
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDTGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacaatcaccctagaggttgagtcttct
gacaccatcgacaatgtcaaagccaagatccaagacaaggaagggattcccccagaccag
cagcgtttgattttcgccggaaagcagcttgaagatggtcgtactcttgccgactacaac
atccagaaggagtcaactctccatctcgtgctccgtctacgtggtggtgctaagaagagg
aagaagaagacctacactaagccaaagaagatcaagcacaagaagaagaaggttaagctt
gctgtgttgcagttctacaaggtggatgatactggaaaagttcagaggcttcgtaaggag
tgccctaatgctgagtgcggtgctggaacttttatggctaaccattttgatcgtcattac
tgtggtaagtgtgggctcacctacgtttacaacaaggctggaggcgattga

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