Solanum dulcamara (climbing nightshade): 129887120
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Entry
129887120 CDS
T09577
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129887120
Membrane trafficking [BR:
sdul04131
]
Protein recycling
Others
EARP complex
129887120
Endosome - Golgi transport
Tethering complex
GARP complex
129887120
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG5_N
COG2_N
Laminin_II
NleF_casp_inhib
Motif
Other DBs
NCBI-GeneID:
129887120
NCBI-ProteinID:
XP_055818055
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Position
4:25860563..25880981
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AA seq
777 aa
AA seq
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MGVDDVPMDDKAKRMRDLLSSFYSPDPSSPSKTPNASSRFATLDTINTTTFDVDQYMNLL
VQKSNLEGLLQRHVDMATEIKNLDTDLQMLVYENYNKFVSATDAIKRMKNNIVGMETNME
QLLEKIMSVQSRSDGVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPARLAKCIKSEAYA
DAVKYYIGAMPIFKIYGDSSFLDCKRASVEAIAIISKALQGKVFSDSESIQARAEAVMLL
KQLDFPVNNLKVQLFEKLEQFLVDLHLEYKEIRYASSGLGGIPVSASSSAHEASICEFAE
AVRAYRVIFPDSEQQLFRLAKELATKHFEATKQHIKKQVSSTDLVAMLRVIWRDVLLMDE
VLPEAGLRDFTFEAAHDAIKQYVACRFSQLLLDISDALVKVHDNQKGVVEEEYPLQSALE
TSKKALVQGSMDALLDSRRLLNENLEVLSRLTDLIIEWVREGFQDFFRKLNDQFFVLSGK
KDSANQDLTFGEGMQGDKVLPELVLLLAQLSVFIEQNAITRITEEISSFSGGGTRGYENS
PAFIPAEICRIFRSAGEEFLQHYISLKTQKILIVLKKRFTTPNWVKHKEPREVHMFVDLL
LQELDTVLNEVKQILPEGLHSKHRRTDSNGSTTSSRSNPLRDDRLVRSNTQKARSQLLES
HLAKLFKQKMEIFTKVEHTQESVITTIIKLFLKSLQEFVRLQTFNRSGFQQIQLDIHFLK
TALKDTAEDEAAVDFLLDEVIVAAAERCLDAIPLEPAILDRLTQAKLAKNSDQNSTS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtagatgatgtgccgatggacgataaagctaagagaatgagagatctgttatca
agcttctattctcctgaccccagttctccttcaaagacgcccaatgcttcttccagattc
gctacattggacaccatcaacaccaccacattcgacgtcgatcaatacatgaaccttctc
gtgcagaagtccaatttggaaggtctgcttcagaggcatgttgatatggctactgagata
aagaatctggataccgacctgcagatgttggtatatgaaaattacaacaagtttgtaagt
gccacagatgctattaaaaggatgaagaacaatattgttggcatggaaacaaatatggaa
cagcttcttgaaaagataatgtctgttcaatctagaagtgatggggttaatacttctctt
tttgaaaagagagagcacatagagaaattgcatcggacccgcaatcttctacggaaagtt
cagttcatatacgatctacctgctaggttagcaaagtgcatcaagtcagaagcctatgct
gatgcagtaaaatactatataggagccatgcccattttcaagatatatggggactcttca
ttcctagactgcaaacgagcctcagtggaagcaattgctatcattagcaaagccttgcag
ggcaaggtattctcagattctgaatccatacaagccagggcagaggctgttatgctcctt
aagcaattagattttccggttaataatttgaaggtgcaactctttgaaaagttagaacag
ttccttgtggatcttcatctagaatataaggaaataagatatgcttcatcaggccttggt
gggattcctgtatcagcttcttctagtgctcatgaggcttctatttgtgaatttgctgag
gctgtccgcgcttatcgagttattttccctgattccgaacaacagctctttaggcttgca
aaagagttagctacaaagcactttgaagccacgaaacagcacatcaaaaagcaggtctct
tcaacagaccttgttgccatgttgcgagtaatttggagagatgtgcttctgatggatgaa
gtgctgccagaggccggactacgtgattttacgtttgaggctgctcatgatgctatcaaa
caatatgttgcttgcagattcagtcagcttctgctagatatttcagatgctcttgtaaaa
gtccatgataatcaaaagggggtagttgaagaagagtatcctttgcagtctgcccttgag
accagcaaaaaggcattagttcaaggcagcatggatgccttgctggattcccgtcgactt
cttaatgaaaacttggaagtgctatcacggttgacagacttgatcattgagtgggtgcga
gaaggatttcaggacttcttcaggaagctgaatgatcaatttttcgtgctttcgggaaag
aaagattcagctaatcaggatctaacctttggggagggaatgcagggtgataaagtactt
cctgagcttgttctcttactggctcaactctccgttttcattgagcaaaatgccattacc
agaatcactgaggaaatatcttctttttctggtggtgggactcggggctatgaaaatagt
ccagcttttattcctgcagaaatctgtcgcatctttcgatcagctggtgaagaattcttg
cagcattatataagcttgaaaactcaaaagatcttgattgtgttgaagaagaggtttaca
acccccaattgggttaagcataaagagcccagggaagttcatatgttcgttgatctgctt
cttcaagagctggatacagtccttaatgaagtaaagcaaatattgcctgaagggctccac
tctaagcatcggcgtacagacagcaatgggagtaccacttcttctcgtagtaatccattg
agagatgataggctggtacgatcaaatacccaaaaggctaggagtcagcttcttgagtcc
catttagcaaaattgtttaagcagaagatggaaatatttactaaagttgaacacacacag
gaatcagtcataactacgattataaaacttttcttgaagagtctacaagaatttgtccga
cttcagacttttaaccggagtggatttcaacaaattcagttggacattcattttcttaag
accgctcttaaagatactgctgaagatgaagcagctgttgattttttgcttgatgaggtg
attgttgctgctgctgaacgttgtcttgatgccattcctctggaaccagcaatcttggac
aggcttacccaagcaaaattggcaaagaattcggaccagaactctacttcataa
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