Solanum dulcamara (climbing nightshade): 129887174
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Entry
129887174 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129887174 isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00280
Valine, leucine and isoleucine degradation
sdul00650
Butanoate metabolism
sdul01100
Metabolic pathways
sdul04146
Peroxisome
Module
sdul_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
129887174
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
129887174
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129887174
Enzymes [BR:
sdul01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
129887174
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
129887174
NCBI-ProteinID:
XP_055818132
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All DBs
Position
4:28054956..28070070
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AA seq
411 aa
AA seq
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MLARKVMKKTLRWRLRTTPFAFEEQFSGFTRSFGAENNTSSLINLSKDIEGGAFQLRRQM
RSDSSCNPLFNQDHRVVRTSIVSFSLSNRYYRSHGHLKDIKDKSLGSVPEVVKIVEVSPR
DGLQNEKTIIPTEVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADGKDVIEAVRNLTGV
RLPVLTPNLKGFEAAVAAGAKEVAIFAAASESFSRSNINCSIEDSLARYRDVALAAKNHS
IPVRGYISCVVGCPIEGAVSPSKVAYVAKELVDMGCFEISLGDTIGVGTPGTVIPMLDAV
TQVVPVERLAVHFHDTYGQALSNILVSLQMGISIVDSSVSGLGGCPYAKGASGNVATEDV
IYMLNGLGVKTNVDLRKLLLAGDFICKHLGRPSGSKAAIALSRTTATASKL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgttagctcgtaaagtaatgaagaaaacattaagatggagattgagaactacacctttt
gcttttgaggagcaatttagtggatttactaggagtttcggagcagaaaacaacacttcg
tctctaatcaatttgagcaaggatattgaaggaggagcattccaattgcgaagacaaatg
agaagtgattcatcatgtaatcctttatttaatcaagatcatagggtggttagaacaagc
attgtatctttttctttgtcaaatcgttattatagaagccatggacatttaaaagacatc
aaagacaagtccttaggatctgtccctgaagttgtcaagatagtagaagttagcccaagg
gatggactgcaaaatgaaaagacaataatacctactgaagtgaaggtggagcttattaaa
ttacttgtttctagtggactgccagttgttgaggctactagttttgtgtctccaaagtgg
gtaccacagttagctgatggaaaggatgtaattgaagcagttaggaaccttacaggggtg
cgcttacctgttttgacaccaaatcttaaaggttttgaagcagctgttgcagctggagcc
aaggaagtggcaatctttgctgcagcatccgagtccttttctcggtctaacataaattgt
agcattgaagacagtcttgctcgttatcgtgatgttgcccttgcagccaaaaaccattcc
atccctgttcgcgggtatatatcatgtgttgttggctgtcccatagaaggagcagtgtct
ccatcaaaagttgcatatgtggctaaagaacttgtagatatgggttgctttgaaatttct
cttggtgacacaattggagttggtactccaggtactgttattccaatgcttgatgcagta
actcaagttgtccctgtagagaggcttgctgttcattttcatgacacttatggacaagct
ctttctaacattcttgtgtcgttgcaaatggggatcagcatagtggattcatctgtatca
ggacttggcggttgcccatatgccaaaggtgcctcgggtaatgtggctactgaggatgtc
atttacatgctcaatggactaggagtgaagacaaatgtggatctgagaaagcttctattg
gctggagatttcatctgcaaacatttgggtcgcccttctggttctaaggctgctattgcc
ttgagcagaacaacagctactgcctcaaagctttaa
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