Solanum dulcamara (climbing nightshade): 129887270
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Entry
129887270 CDS
T09577
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11-like isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129887270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129887270
03036 Chromosome and associated proteins [BR:
sdul03036
]
129887270
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
129887270
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
129887270
RSF complex
129887270
WICH complex
129887270
B-WICH complex
129887270
NORC complex
129887270
BRF complex
129887270
NuRF complex (fruit fly)
129887270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
129887270
NCBI-ProteinID:
XP_055818277
LinkDB
All DBs
Position
4:complement(32501019..32518049)
Genome browser
AA seq
1065 aa
AA seq
DB search
MARNTRAKSSSSEPLSEGSEEDQVNDEEDEEELEAVARSAEDDGDDEAVVLREDDDDDNE
EDAAANEISKREKARLKDLQRRKKQKIQEMLEAQNAAVQADMSNKGKGRLKYLLEQTELF
AHFAKGDQSTSAKKTKGRGRHASKITEEEEDEEYLKEEDGGMSGNTRLLAQPSCIQGKMR
DYQLAGLNWMIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTL
GNWMNEIKRFCPIIRAVKFLGNPEERRYIREDLLVAGKFDVCVTSFEMAIKEKSALRRFN
WRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSS
AETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQK
NYYRALLQKDFEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLIENAG
KMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLMYRGHQYCRIDGNTGGEDRDASIE
AFNRPGSEKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQ
VFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSK
DSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDNGLLFTAADLYDFDDEKDE
NKADFKKIAGDNWIEPPKRERKRNYSESEYFKQTMRPSGPARPKEPRIPRMPQLHDFQFF
NTQRLSELYEKEVRFLMQAHQKNQLKDSIEVEEPEDVGDPLTAEEQEEKDKLLEEGFSTW
SRRDFNTFIRACEKYGRNDIESIAAEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIE
RGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYG
NWDELKAAFRTAPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEFDERERQARKEKKL
AKNMTPSKRTVARQAAKSPPTSKKRKQSSMDDFVSSGKRRSDGST
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaacacgagagcgaaatcctcctcgtcggagccattatcggaaggttctgag
gaggatcaagtcaacgatgaggaagacgaggaggaacttgaagctgtcgctaggtcagca
gaagacgacggtgacgacgaagctgttgttcttagagaagacgatgatgatgataatgag
gaagatgctgcagctaatgagatctccaagcgtgaaaaggcaagattaaaagatttgcag
aggcgtaagaagcaaaagatacaggaaatgttggaagcacagaatgctgcagtacaagct
gacatgagtaacaagggaaaggggcgtctgaagtatcttttggagcagacagaattgttt
gcacattttgcaaaaggtgatcagtcgacttcagcaaagaagacaaaaggaaggggtcgt
catgcttcaaagataactgaagaggaagaagatgaggagtatctcaaagaagaagatggt
gggatgtccgggaatacacggctattggcacaaccctcttgtattcagggaaagatgagg
gattatcaacttgctggtttgaactggatgatacggctatatgagaatgggataaatggg
atacttgctgatgaaatgggtcttggtaagactttgcaaaccatctctttgctggggtac
ctgcatgaatttagagggattactggtcctcacatggttgttgctccaaaatccacgcta
ggcaattggatgaatgaaatcaaacgtttttgtcctatcatacgggctgtaaagttcctt
gggaaccctgaagaaaggagatacattcgagaggatttactagttgctgggaagtttgat
gtgtgtgtcacaagttttgagatggctatcaaagagaagtctgctttacggcgctttaat
tggcgttacatcatcattgatgaggctcatagaatcaagaatgaaaattctcttctttcc
aaaaccatgaggctctacagcactaattataggctgttgatcacagggacaccacttcag
aataatcttcatgaactctgggcgcttctgaactttttgctgccagagatctttagctcg
gctgagacctttgatgagtggtttcaaatatctggtgagaatgaccagcaggaggtggtc
caacagcttcataaggtccttcgtcctttccttcttaggagactgaagtctgatgttgag
aaaggtctgcctccaaagaaggaaacaattcttaaggttggtatgtctcagatgcagaaa
aactactatagggctctgttgcagaaagattttgaggttgttaattctggaggagagcgc
aagcgtcttcttaatatagcaatgcagctacggaaatgttgtaatcatccatatcttttc
caaggagctgagccaggacctccatatacaaccggagagcatctcatagaaaatgctggc
aaaatggttcttctagataagttgcttcctaagctgaaggaacgtggctcaagggtttta
atattttcacagatgacaaggctactggacatccttgaagactacctgatgtaccgaggt
caccagtattgtcggattgatggaaacactggtggagaagatcgtgatgcttcaattgaa
gcatttaacagaccagggagtgaaaaatttgcgttcttattgtcaaccagagcaggtggt
cttggtatcaatcttgctacagcagatattgtaattctttatgacagtgactggaatcca
caggttgatttgcaggctcaggatcgtgcccataggattggacagaaaaaggaggttcaa
gtattccgtttctgcactgagtatacaattgaggagaaagtgattgaaagggcttataag
aagctggcacttgatgcactggttatccagcagggtcgactggctgagcaaaaagctgtc
aacaaggatgagctgctgcagatggtgcggtttggtgctgaaatggttttcagttccaaa
gatagcactattacagatgaggatatagatagaatcattgccaaaggagaagaggcaaca
gcagaacttgatgccaaaatgaagaagtttacagaagatgcaatcaaatttaagatggat
gataatggactgctttttacagctgctgatttgtacgactttgatgacgagaaggatgaa
aacaaggcagatttcaagaaaattgctggtgacaattggatagaacctccaaaaagggag
agaaagcgcaattactcagagtctgaatatttcaagcaaaccatgcgaccaagtggtcct
gcaagacctaaagagcctaggattcctaggatgcctcagctgcacgactttcagttcttt
aatacccagaggctaagtgagctgtacgagaaggaagtgcgttttctcatgcaagctcac
cagaaaaatcaattaaaagacagtatagaagtggaagagcccgaagatgtgggagatcct
ttaactgctgaggaacaggaagaaaaagacaaattattggaggagggattttcaacgtgg
agtaggagagacttcaatacttttatcagggcatgtgagaagtatggtcggaatgacata
gaaagtatcgctgctgaaatggaaggaaagacagaggaggaggttgaaagatatgcaaaa
gttttcaaagaaagatacaaagagctaaatgattatgataggattataaagaacattgaa
agaggagaggctagaatttcacgaaaagatgaaataatgaaagcaatcggtaagaagttg
gaccgctacaagaatccatggttggagttgaagatccagtatggtcagaacaaaggaaaa
ttgtataatgaggagtgtgatcgtttcatgatatgtatggttcacaagcttggctatgga
aactgggatgagctgaaggctgcattccgaacggcacctttgtttcggtttgattggttt
gtgaagtctcggacgactcaagaacttgccagaagatgtgatacacttattcgtttggta
gagagggaaaaccaagaatttgatgaaagggagaggcaggcacgcaaggaaaagaaactt
gcaaagaacatgacaccatcaaaacgcactgtggcaagacaggcagccaaaagccctccc
acctcaaagaagcggaagcagtcatcaatggatgattttgtgagctcgggcaagagaaga
agtgatggttcaacttag
DBGET
integrated database retrieval system
