Entry |
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Name |
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KO |
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Organism |
sdul Solanum dulcamara (climbing nightshade)
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Pathway |
sdul04141 | Protein processing in endoplasmic reticulum |
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Brite |
KEGG Orthology (KO) [BR:sdul00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129887279
04120 Ubiquitin mediated proteolysis
129887279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:sdul04121]
129887279
Ubiquitin system [BR:sdul04121]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
129887279
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4:complement(33309461..33322507)
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AA seq |
742 aa
MNQRSTIDLEHGWEFMQRGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYS
QQLYDKYREAFEEYITTTVLPSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYF
IARRSLPGLNEVGLTCFRDLVYQELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVE
IGMGSMDYYENHFEAAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL
HSSSETKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKVEDLSRMYRLFSKIPRGLDP
VANIFKQHVTAEGTALVKQAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNNC
FQNHTLFHKALKEAFELFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKV
VKLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVT
DLTLARENQASFEEYLSNNPIANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVRCVEVFK
EFYQTKTKHRKLAWIYSLGTCNINGKFEPKTIELVVTTYQASALLLFNASDRLSYQEIMT
QLNLSDDDVVRLLHSLSCAKYKILNKEPSTKTISPTDVFEFNSKFTDKMRRIKIPLPPVD
EKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDVKAIKKRIE
DLITRDYLERDKDNPNLFKYLA |
NT seq |
2229 nt +upstreamnt +downstreamnt
atgaaccaacgtagcacaatcgatctggaacatggatgggaattcatgcaaaggggcatt
acaaagctgaagaacattctagaaggacttcctgagcctcagttcagctcagaggactat
atgatgctgtatacgacaatttacaacatgtgtactcagaagcccccacatgattattct
caacagctctatgacaaatatcgtgaagcttttgaagaatatatcacaacaacggtattg
ccttctttgagagaaaaacatgacgagttcatgttgcgagagctggtaaaaaggtggtca
aaccataaggtcatggtcagatggttgtcgcgattcttccattatcttgaccgctatttc
attgcccggagatcgctgccggggcttaatgaagttggactaacttgcttccgtgatctg
gtataccaagagttgaatggaaaagtcagggatgctgttatatctctgattgatcaagag
cgtgagggagagcaaattgacagagctctactgaagaatgtgctagatatatttgttgaa
attggaatggggtcaatggattattatgagaatcattttgaagctgcaatgctcaaggac
actgcagcttattattctcgcaaagcttctaactggatacttgaagattcatgtccagat
tatatgctgaaagccgaggagtgcttgaaacgggagaaggatagggtctctcattatctc
cattcaagcagtgagacaaagttgcttgagaaagtgcaacatgagttgttgtctgtgtat
gccactcaacttcttgagaaggagcactctggatgccatgcattacttagagatgataag
gtggaagatttatcaaggatgtataggctcttttctaagattcctcgaggcttagaccct
gtggctaatatatttaagcagcatgttactgctgaaggtacagctctggtgaaacaggct
gaagatgctgctagcaacaaaaaggcagagaagagagatgtggttggtttgcaagaacag
gtttttgttcggaaagtaattgagcttcatgataaatatttggcatatgtgaataactgt
ttccagaaccacacactttttcacaaggcacttaaagaagctttcgaacttttctgcaac
aagggtgttgctggtagctcaagtgctgaacttcttgccactttctgtgacaacattctc
aaaaaaggtgggagtgaaaaattgagtgatgaagccattgaagagacgttggagaaggtg
gtaaagctgctagcttatattagtgataaggacttgtttgcagaattctataggaaaaag
ctagcccgacggttgttatttgataagagtgccaatgatgaacatgagagaagtatccta
acaaagttgaagcagcagtgtgggggccagttcacatcaaagatggagggtatggtcaca
gatttgacattggcaagggagaatcaagccagctttgaggagtatttgagcaataatcca
atagcaaatccaggaattgacttgacggtgactgtcttgactactggcttctggcctagc
tacaagtcttttgatctcaacctcccagcagaaatggttaggtgcgttgaagtattcaag
gagttttatcaaacaaaaacgaagcacagaaaacttgcgtggatatactcattgggaact
tgcaacataaatggaaaatttgagccaaagactattgagctcgttgtcactacttatcag
gcttctgctttgctgctctttaatgcatcagatagattgagttaccaagaaatcatgacg
caattaaacctatcagatgatgatgttgttcggcttcttcattccctttcatgtgcaaag
tacaagattctcaacaaggagccaagcaccaaaacaatttctccgactgatgtctttgag
ttcaactcaaagttcactgacaaaatgaggaggatcaagatacctctccctcctgttgat
gagaagaaaaaggtaattgaagacgttgacaaggatcggcggtatgctatagatgcttca
attgtgcgtattatgaagagtcgtaaagtattgggctaccagcaactggtcatggagtgc
gttgagcagttaggacgaatgttcaagcctgatgtcaaagctatcaagaagagaattgaa
gatttgataactagagattacctagagagggacaaagataacccaaacttgttcaagtac
ttggcatga |