Solanum dulcamara (climbing nightshade): 129887305
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Entry
129887305 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129887305 isoform X1
KO
K10895
fanconi anemia group I protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129887305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129887305
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
129887305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
129887305
NCBI-ProteinID:
XP_055818328
LinkDB
All DBs
Position
4:35383265..35390742
Genome browser
AA seq
1515 aa
AA seq
DB search
MTSTATKPPSAAQNHQQPPLTPALTDADIVQLAQLYHPQSSTPLPAFLLSEDSHQTLVSY
LHSRASSPNSTLAVSEYLSAILSLTQLHTSLSPLVPLLLSSYISLFTSHKIPHDKSSLSI
FQLFVTHIQTVQVQELPVIVDLIISYLPRIIDSEDTHILAIFAKCIELIRFSNEIGKPLE
YVDKVFDKMLSCDWSKVLLLKLVEIVKDLNFIGKGKRKEFLERVFSGMRNVDLQDLPGLV
YQLLVLGSKGFGKKDVIEGIVMYFGGVKSGGSIMRQVEGTVLLHVNFAVKQNPSLGQEVL
GLVRSDYRVFNHFTVAILLSVARVKRLTESSIGVLKTSLFAAYKDLKFARSCKWLSCDLK
EHYLHTYKDMENAVLRAVAESNCGREHVVPSIVQLGFVLLEGIEEGSKFFDKSDDVMGPD
ELGTQVLKSLFEVHDMARNEIIEQCKLRILSLKPEQGFPVIRLLGCLIHTYKYPMLEHIS
HLKELLDYFTFMNDKVSSHLVAALLPLSRLSRDLQDYTILVLRKAMFRQEDSIRLAATSS
IVNLILAEKQSTKDGPFSYQDSSSQASSSQQAEVFRALGSSLFQELNGLLQRCLFQQAKV
REILYRGLLKLVLVDPLTSGAVFDFLFPHFLRFYREDADFLLDVNQCTKSESGKVYIQEP
LDCLLSCISWMLLLQPHGKTDHPSDSWTCFGFSLTQENEQAGKAWSKGSLSNALSKIRNY
LRNADMEGLLSKTQDTDSSSLEEEKRKCCSSILLGIIEVMLNIVGTEFGKTTDGKKLELE
KELFDFIGIFESLDQNVCRQGGGSTQRGSIWSTSSNASEELELSGRKLCPERVPLLATSI
IYQLLQSTVESWRCDGFNNNVASQKHSQLSSGKAPTQYYKILSFTLNICLRQLKAASVVR
QQDPLKMLIYGEIKQLGSPLLKIIWRLLSEPKSMIDSRKKDANMKKDLDDRKEYIHLGLL
SLKELLAVTLHELDYSVLIDYLAAVSGPGNEGGNTMDGHLDTECKRADDIPYKYTSEELF
IKNSIRPLISMLLARSFFREVEVLCDIIMLISNKLPEERRNLVGNWAKCICKTSKASNPK
FAKSIVSIAILLSSPPNDLIIAEDMAAELLKMVGSESEMGDSQVTLDAYSIINKSTSAPL
ASLILDLVESVIIDTEWVIMKLKIYSLPNMRAVLVNQNGEKDTRLALEETVYSRAEAVVK
VLSSFIKMDLKDPQAEQLVKLAARFYKNLARMSKLLIASKGVQQPLPSLKYQKLVEITCR
QLTTPIYNFVPLMQRKQLDSTKSKALVSKIKRENRCIPDLIYQIEDCEKYLIQISKATKI
NLLRHAKRSTSRDFKIIEPQSFPVEEDAGIQDADNDGAARGEGESSEDPRDEAHGVEDDS
VAGAHDDDEGDEVEAYNSPHAVEDDSVAGADDDVGNKVEAAYNSPHGVEDDSVAGADDDA
VGNEVEEAYNSPRGVEDDSVTAAAAADEGNEVEEAYNSPPAVVASESENDAEAADLPKAK
RAKMRRVVEDSDEEA
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccgcaaccaagcccccgtccgccgcccaaaaccatcaacaaccaccgctg
acgccggcgttgactgacgccgacatagttcaattagctcaattatatcacccgcaatcc
tccactcctctacccgcttttcttctctccgaggactctcaccagacccttgtatcctat
ctccactcacgcgcctcttctcctaactccacactcgccgtctccgaatacctttcagct
attctctcccttacccaactccacacttcactttcccccctcgtccctcttcttctttct
tcctacatttcccttttcacatcccataaaatcccccatgacaaatcctctctctccatt
ttccaattgttcgtgacccatattcaaacagtccaggttcaagaattaccggtaatagtc
gatttgattatatcttatttacctcggattattgattctgaggatacccatattctggct
atatttgctaaatgtattgaactgatcagattttctaatgagatcggtaaacccttggaa
tacgttgataaggtgtttgataaaatgcttagctgtgattggagtaaggttttgttgtta
aaattggtagaaattgttaaggatttgaattttattgggaaggggaaaaggaaggaattt
ttggagagggtatttagtggaatgaggaatgtggacttgcaggatttgcctgggttggtg
tatcaattgttggtattgggatcaaaaggttttggtaagaaggacgttatcgaagggatt
gtgatgtattttggtggggtgaagtcaggtggttcaataatgaggcaagttgaagggact
gtgttgcttcatgtgaattttgctgtgaagcaaaatccttctttgggacaagaggtgtta
gggctagtgaggtctgattatcgggtgtttaatcattttactgttgctatattgttgtca
gttgctagagtgaagaggctcactgagagctctattggggttctgaaaacatcacttttt
gctgcttataaagacttgaagtttgccaggagctgtaagtggctatcatgtgacttgaag
gaacactatttgcatacttacaaagacatggagaatgctgtgctaagagctgttgctgag
agcaactgtggtagagaacatgtggttccaagtattgtacaacttggatttgtgttgctt
gaaggaattgaagaaggaagtaaattttttgataagtctgatgatgtgatgggtcctgat
gagctaggtactcaggttctcaagagtttatttgaggttcatgatatggcaagaaatgag
ataatagagcaatgcaaattacgtatcctctctttaaagcctgaacaaggctttcctgta
ataagactgcttggttgtcttatccatacttataaatacccaatgttggagcacatttca
catctgaaggaattgttggattatttcacattcatgaatgacaaggtctcatctcatctt
gttgctgcccttttgcctctaagcagattaagccgtgatcttcaggactataccatcttg
gtcttgcgtaaagcgatgtttagacaagaagactccatccgtcttgctgcaacaagttca
attgtcaatttgatattggctgaaaaacaatcaacgaaagatggaccattttcttatcaa
gactcaagcagtcaagctagtagcagccagcaagctgaagttttccgtgcacttggttct
agtcttttccaggagctaaatggtttgttacagaggtgtctctttcaacaggcaaaggtc
agagagattctatatcgtggacttcttaagcttgttttggtggatcctttaacttctggg
gctgtttttgattttctcttccctcatttcttgcgattttacagagaggatgcagatttt
ctactggatgttaaccaatgtactaaatcagagagtgggaaagtgtatattcaagagcca
ctagactgccttctctcctgtatctcctggatgcttcttcttcagccacatgggaaaact
gaccatccttcagattcatggacttgctttggcttctctctgacacaagagaatgagcag
gctggaaaagcatggtccaaagggtcactgtccaatgcgttatcaaagattcggaactac
ctgcgaaatgcagatatggaaggcttactcagcaaaactcaggatacagactctagttcc
ttggaagaggaaaaacggaaatgttgttcttcaattttattaggaataattgaggtgatg
ttgaatatagttgggactgagtttgggaaaacaactgatgggaaaaagttggagttggaa
aaagagctgtttgactttattggtatttttgaatctctggaccaaaatgtatgtaggcag
ggtggtggttcaactcaaagaggttctatatggtccacttcaagcaatgcttcagaggaa
cttgaacttagtggcagaaaattatgcccggaacgagtccctctgttagcaacttcaatt
atctatcaactattgcaaagcactgtagaatcatggagatgtgatggttttaacaacaac
gtggcctctcaaaagcatagccaattatcatctggaaaggcaccgactcagtattataaa
attctttcttttactcttaacatttgccttcgtcagctaaaagcagcttctgttgtgcga
cagcaagatcctctaaaaatgttgatctatggggagatcaagcagttgggctcccctttg
ctgaaaataatttggcgcctcctctctgaaccaaaatctatgattgatagtaggaaaaaa
gatgcaaatatgaaaaaagatcttgatgacaggaaggaatatattcatttgggacttctt
tccttgaaagaattgctggcagtaacgttgcatgagttggattattctgttcttatagat
tacttggctgcagtttctggtcctgggaatgaaggaggcaatactatggatggccatctt
gatactgaatgcaaaagagctgatgacattccttacaaatatacaagtgaagaattattc
atcaaaaacagcataaggccactgatttctatgctgcttgcacgttctttcttccgtgaa
gttgaggttctttgtgatattatcatgttaattagcaataaactgccagaggaacgaagg
aatcttgttggtaattgggctaaatgcatctgcaagactagtaaagcatcaaatcccaag
tttgctaaaagtattgtatctattgctatattgttaagttcaccaccaaacgacttaatt
attgccgaagacatggctgcagagcttttaaaaatggtgggatcagaatcagaaatggga
gattcacaagtgacactggatgcgtattcaattataaacaaatcaactagtgccccacta
gcttcactaatactggacttagtcgaatcagttattattgacactgaatgggtcataatg
aaactgaagatatactctcttccaaatatgagagctgttttggttaatcagaatggtgaa
aaggatacacgattggcgcttgaagagactgtttattcaagagcagaagctgttgtaaag
gtgttatcttcttttataaagatggaccttaaggatcctcaggcagagcagttggtgaag
ttagctgcaaggttttacaagaacttagcgcgaatgtcaaagcttctaattgcttccaaa
ggtgtgcaacagcctttaccaagcctcaagtaccaaaagcttgtggaaataacttgcagg
cagctaacaactcctatctacaattttgtgccactgatgcaaaggaaacaactagacagc
acgaaatcgaaagcactcgtcagcaaaatcaaaagggagaacagatgcatcccggacttg
atttatcaaatagaagactgtgaaaaatatctcatacaaattagcaaggcaacaaaaata
aatttgctgaggcatgcaaaaagaagcacctccagggacttcaagataatagaaccacaa
agttttcctgtagaagaagatgctggaatccaagatgcagacaatgatggtgcagcaaga
ggtgagggagaatcatcagaagaccctcgtgatgaagcacatggagtagaagatgattca
gtggccggtgctcatgatgatgatgaaggagatgaagtggaggcatacaatagtccacat
gcagtagaagatgattcagtggctggtgctgatgatgatgtaggaaataaagtggaggcg
gcatacaatagtccacatggagtagaagatgattcagtggccggtgctgatgatgatgct
gtaggaaatgaagtggaggaggcatacaatagtccacgtggagtagaagatgattcagtg
accgctgctgctgctgctgatgaaggaaatgaagtggaagaggcatacaatagtccacca
gcagtagtggcttcagagtctgagaatgatgctgaagctgctgatcttcctaaggcaaaa
agagcaaaaatgaggagagttgttgaggactcggatgaagaagcataa
DBGET
integrated database retrieval system
