Solanum dulcamara (climbing nightshade): 129887320
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Entry
129887320 CDS
T09577
Name
(RefSeq) phospholipase D zeta 1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00564
Glycerophospholipid metabolism
sdul00565
Ether lipid metabolism
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
129887320
00565 Ether lipid metabolism
129887320
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129887320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129887320
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
129887320
Membrane trafficking [BR:
sdul04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
129887320
Endosome - Golgi transport
Others
Others
129887320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
129887320
NCBI-ProteinID:
XP_055818354
LinkDB
All DBs
Position
4:37402832..37421459
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AA seq
1110 aa
AA seq
DB search
MEQLTIGDGPRYVQMQSEPEPEPEPSTLSSLYSFHQDTATRIFDELPQATIVQVSRSDAG
DISPMLLTYTIQVQYKQFKWQLVKKASHVFYLHFALKKRAFFEEIHEKQEQVKEWLQNLG
IGDHTTVIQDEDEPDDEASPVRAEESAKNRDVPSSAALPIIRPTLGRQHSMSDRAKTAMQ
GYLNHFLGNIDIVNSQEVCRFLEVSRLSFSPEYGPKLKEDYIMVKHLPKIQRDDDSRKCC
SCQWFGCCKDNWQKVWAVLKPGFLAFLKDPCDPEPLDIIVFDVLPASDGNGEGRVSLAKE
IKDGNPLRHYFRVSCGSRCIKLRTKSDAKVKDWVAAINDAGLRPPEGWCHPHRFGSYAPP
RGLTEDDSQAQWFVDGESAFEAIALAIEEAKSEIFICGWWLCPELYMRRPFHTNASFRLD
ALLEAKAKQGVQIYILLYKEVAIALKINSVYSKRKLVGIHENVRVLRYPDHFSSGVYLWS
HHEKIVIVDHQICFIGGLDLCFGRYDSPEHKVGDCPPLIWPGKDYYNPRESEPNSWEDTM
KDELDRKKYPRMPWHDVHCALWGPPCRDAARHFVQRWNYAKRNKAPHEQAIPLLMPQHHM
VIPHYMGMSGEMDNGSNGVARPHKNIKRHDSFSSGSSSQDIPLLIPQEAEGGDSFKEELK
INGFHTGHGFHDQRSRPSRIPFSFRKTRVEPLVPDLPMKGFVDELDQNLELSSNLVQPGM
KKLDKDWWEKQERGDQVVSPEENGQVGPRVSCRCQVIRSVSQWSAGTSQIEESIHNAYCS
LIEKAEHFVYIENQFFISGLSGDEIIKNRVLEAVYRRIMRAYNEKKSFRVIIVIPLLPGF
QGGLDDSGAASVRAIMHWQYRTICRGSNSILHNLNDLMGSRMHDYISFYGLRAYGRLFDG
GPIATSQIYVHSKIMIVDDHTALIGSGNINDRSLLGSRDSEIGVLIEDKEFVDSFMGGKP
RKAGKFALTLRLSLWSEHLGLRTGEVGQIKDPVVDPTYKDIWMSTAKTNTMIYQDVFSCI
PNDLMQSRVSLRQCMAFSKEKLGHTTIDLGIAPSKLESYQGGDIESIDPMERLKSVKGHL
VSFPLDFMCKEDLRPVFNESEYYASAQVFH
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttgacgatcggcgatggacctcggtacgtccagatgcaatcggagccggag
cccgagccggagccttctactctttcatccttgtactcctttcatcaggatactgcaact
cgaattttcgatgagttgcctcaggctaccatcgtacaggtctcgagatccgatgccggc
gacatcagccctatgcttctaacttataccattcaagtccaatacaagcagttcaagtgg
caattggtgaagaaagcctcacatgtattttatttacattttgcattaaagaagcgtgca
ttctttgaggagattcatgagaagcaagaacaggtcaaagaatggcttcaaaacttgggg
ataggagatcatacaactgtaatacaagatgaggatgaacctgatgatgaggctagtcct
gtgcgtgctgaggaaagtgccaaaaacagagatgttccgtctagtgctgctttgccaata
attcggccaaccctcggaaggcagcattcaatgtcagatagagcaaaaactgctatgcag
ggttacttgaatcactttcttggaaatatagatattgtcaattcccaggaggtctgcagg
tttctggaagtttcaagattatccttttcgcccgagtatggtcctaagctaaaagaagac
tatattatggtgaagcacttaccaaaaattcaaagggacgatgatagtcggaaatgttgt
tcatgtcagtggttcggttgctgtaaagacaactggcagaaggtctgggctgtattgaaa
cctggattcctggctttcctcaaagatccatgtgaccccgagccattagatataatagtg
tttgatgtactaccagcatccgatggcaatggtgagggtcgcgtttctttagcaaaagaa
ataaaagatggaaaccctttacgccactattttagggtgtcttgtggttcaaggtgtatc
aaactgaggaccaagagcgatgcaaaggttaaagattgggtagcagcaattaatgatgca
gggcttaggccacctgagggatggtgtcatcctcaccgctttggttcttatgctcctcct
aggggtttgacagaggatgacagtcaggctcagtggtttgttgatggtgaatcagcattt
gaagctatagctttggctattgaagaagcaaagtcagagatctttatatgtggctggtgg
ctgtgtcccgaactttatatgcgacgtccctttcacactaatgcatccttccggcttgat
gctttactggaagccaaagcaaaacaaggtgttcagatctacatccttctgtacaaagag
gttgctattgctttaaaaatcaacagtgtgtatagcaagagaaagctggtaggcatccat
gagaatgtcagagtgttgcgttatccggatcatttctcaagtggtgtgtatctatggtcc
catcatgaaaaaattgtcattgttgaccatcagatttgctttatcggaggactggacctg
tgctttggccgttatgactcacctgaacacaaagtgggtgattgtccacctcttatatgg
cctggaaaagattattataatccaagggaatctgaaccaaattcctgggaagataccatg
aaggatgaattagaccggaagaagtatccacgtatgccatggcatgatgtccattgtgcc
ctctggggaccaccgtgccgtgatgctgctcgacactttgttcagcgctggaattatgca
aagaggaacaaagctccacatgagcaagcaattccgctgcttatgcctcagcatcacatg
gttattcctcattacatgggaatgagcggtgagatggacaatggaagtaatggtgttgcg
cgtcctcataaaaatatcaaaagacatgattcattttcttcagggtcttcttcccaagat
attcctttgcttattcctcaggaagctgaagggggggatagtttcaaggaagaactaaaa
ataaatggcttccatacagggcatggttttcatgatcagcggagcaggcctagcagaatc
cctttctctttccggaagacccgtgtagagcctctagttccagatttgccaatgaaagga
tttgtggacgagttggatcaaaatctggagctatcttcaaatctggtgcagcctggcatg
aagaagttggacaaggattggtgggagaaacaagagagaggcgatcaagttgtttcacct
gaagaaaatgggcaagttggtcctcgtgtttcatgtcgttgccaggttataaggagtgtc
agtcaatggtcagctggaacaagtcaaattgaagaaagcatacacaatgcttactgctcc
cttattgaaaaggctgaacattttgtttacatagagaatcaatttttcatttctggtcta
tctggagatgaaattataaaaaatcgtgttttagaagcagtgtacaggcgtattatgcga
gcttataatgaaaagaagtccttcagggttatcattgtgataccacttcttcctggcttc
cagggtggtttggatgatagtggtgctgcttcagttagagctattatgcattggcaatat
cgaacaatatgcagaggatcgaattcaatattgcataatcttaatgacctcatgggctct
agaatgcatgactatatatcattttatggtctcagagcttatggaaggctctttgatggt
ggtcctattgcaactagccagatatatgtgcatagcaagattatgatagttgatgaccat
acagccttgattggatctggaaatataaatgaccgaagcttgcttggttcaagagactct
gagattggggtacttattgaggacaaggagtttgtcgattcattcatgggaggcaagcca
aggaaggcgggaaaatttgcattaactcttcgcctttctctatggtctgagcaccttggt
cttcgtacaggcgaggttggtcaaattaaggaccctgtggttgatccaacatacaaggat
atttggatgtcaactgctaagacaaataccatgatataccaagatgttttttcttgcata
cccaacgatctgatgcaatccagggtttcactccgacaatgcatggcattctcaaaagaa
aaacttggtcacacgaccattgatttaggaatagctccaagcaagttagaatcttatcag
ggtggagatattgagagtatagatcccatggagagattaaaatctgtgaaaggtcatctt
gtttccttccctttggattttatgtgcaaagaagatttaagacctgtgtttaatgaaagt
gagtactatgcatcagctcaagtttttcattaa
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