Solanum dulcamara (climbing nightshade): 129887331
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Entry
129887331 CDS
T09577
Name
(RefSeq) two-component response regulator ARR1-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129887331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129887331
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129887331
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GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
129887331
NCBI-ProteinID:
XP_055818370
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Position
4:37863485..37868037
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AA seq
664 aa
AA seq
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MNIGSGSSWKSGDVVSDQFPVGLRVLVVDDDPTCLRILEKMLRNCHYEVTKCNKAEVALS
FLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKDVVMKGVTHGAYD
YLIKPVRIEALKNIWQHVVRKKKHEWKDNNFDQSASVEEGDRQQKPSEDVDYSSSANEGN
WKNSKKRKEEEEEAEDTSSLKKPRVVWSVELHQQFVQAVHQLGIDKAVPKKILELMNVPG
LTRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMGRPDATFGAISSINGLDLQAIAAAG
QIPAQSLATFQAAALGRSATKSAISMPLVDQRNLFSFENSQVRFPEGQQQLNNSNKQIDL
LHGIPTTMEPKQLANLHHPSQSFMGMNMQVIPMAQQNNSVLMRMSQSQPRAQMLSGTNNG
SHVSRLPLPMQQSLSSEGIPGAVLAQSHIVDDARVYNPVSQASSMVDFSVNQSKEFQSYN
FSLGSNSSGMSTLTNQGMLQEEVNPDIKGSRGFPSNYDIFNELQQPKSQNWGSQNVGSTF
DASHHPSIQGPQGVSSQLLLQQGISSTHNNGQNRNGPIGKPMYSNGEESGHANLMSGPQL
NSVSGNMLAVKAERFPDTDYQSTSFPEQFGQDDLMSALLKQQGSVGPVETEFGFDGYTLD
NLPV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaatattggtagtgggtcttcttggaagtccggtgatgtggtttccgatcagtttccg
gtgggactccgagtacttgtagttgatgatgaccctacctgtttaaggatcttggagaag
atgctcaggaactgtcactatgaagtcaccaagtgtaataaggctgaggttgcactatca
tttctgcgggaaaacaagaatggttttgacattgttataagtgatgtccacatgccagac
atggatggtttcaaacttcttgagcacattggtctggagatggacctgcctgttataatg
atgtcggccgatgatagtaaggatgtggttatgaaaggagttactcatggtgcatatgat
tatctaatcaaaccggtgcggattgaggcactaaagaatatatggcaacatgttgttcgt
aaaaagaaacatgagtggaaggacaataattttgatcaatcagcaagtgtggaagaggga
gatcggcagcagaaaccatcagaagatgttgattactcatcttcagctaatgaaggaaac
tggaaaaactccaagaaaagaaaggaagaggaagaagaagctgaagatacatcctcacta
aagaagccacgtgttgtttggtctgtggagcttcatcagcaatttgtacaagctgtgcat
caacttggaatcgacaaggccgttcccaagaaaatcttggaactgatgaatgttcctgga
ctaaccagagaaaatgttgctagccatcttcagaaatatcggttgtatctcagaaggttg
agtggtgtatcgcagcaccagaacggactgaacaattctttcatgggacgtccagacgca
acctttggagcaatatcttccatcaatgggcttgatcttcaagctattgctgctgctggt
caaatccctgcacaaagtcttgctaccttccaagcagcagccctaggtagatctgctaca
aaatctgccatatctatgcccctagtagatcaaagaaaccttttcagctttgaaaattcc
caggtgagatttccagaagggcaacaacaactgaataacagcaataagcaaatcgacttg
ctgcatggaattccaaccaccatggaaccgaagcagcttgcaaatttgcaccacccttcc
cagtcctttatgggtatgaatatgcaagtgatccccatggcacagcagaataactctgtg
cttatgcgaatgtcccaatcacaacctcgggctcaaatgctaagtggaactaataatggc
agccatgtttcaaggcttccactgcccatgcagcaatctttgtcatcagaagggatacct
ggtgcggtcctagcacagagtcatattgttgacgatgcacgtgtgtacaatccagtctcc
caagcctcttcaatggtagatttctcggtaaatcaaagcaaggagtttcaaagctacaac
ttttctcttgggagtaatagttcagggatgtccactttgacaaatcaagggatgcttcag
gaagaggtgaatcctgatatcaaaggatctagaggcttcccttctaattatgatattttc
aacgaactccagcagccaaaatcacagaactggggttcacagaatgttggttcaaccttt
gacgcatctcatcatccaagtatacaaggacctcagggtgtctcatctcaattgttactg
caacaggggatttcttcaacacacaacaatggacaaaacagaaatggtcctattgggaaa
ccaatgtactccaatggggaagaaagtggacatgctaatcttatgagtggaccacaactc
aactctgtcagtgggaatatgcttgctgttaaagctgaaagatttcccgacacagactat
cagagtaccagtttcccggagcaatttggacaggatgacctcatgagtgccctcctaaaa
cagcaaggaagtgttggaccagtggaaactgaatttggcttcgatggatacacattggac
aatcttccagtttaa
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