KEGG   Solanum dulcamara (climbing nightshade): 129887396
Entry
129887396         CDS       T09577                                 
Name
(RefSeq) protein RDM16-like
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129887396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdul03041]
    129887396
Spliceosome [BR:sdul03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    129887396
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 129887396
NCBI-ProteinID: XP_055818451
LinkDB
Position
4:complement(44674134..44679182)
AA seq 790 aa
MDRASEKDKSSRDYRDKHRSSKDKHYEDDHRHHHHRSKHRSEDGHHRSEREGSRERAHYH
DRKEESVEKKHSHKRKDRAESADRSNADDKRARVSDNKKEKRRTEDENGRDKQRVDDGDW
RDKDEERRERRRFEDKAKEEDVEVDEERRRGGFEITTSKKETKEEPTDHVQDEAVGSIAK
IPGKSSTDGTASGAGKSGSLSLDALAKAKRALQMRKELAEKLKKIPALNKNKGPNFTREG
LPQVGAKESLQPSANAAIFPTPVASSDAGVLLTPGSAPSTSNPPPSGLPHLVGLTAQKYE
AVKRAQELASKMGFRQDPEFAPLINMFPGQMPPEVTLQPKPAKAPVLRLDALGREIDEQG
NIVNMPKPSSTLKVNINKKKQEAFQILKPELEVDPEKNPHFDPSMGIDKNKILRPKRMTF
QFVEEGKWSRDAEIIKLKSQFGEARAKELKAKQAQLTKAKAEPDINPNLIEVSERVIAKE
KQKEPIPEVEWWDAPLLRSGSYGDIVDGNVTNEQLKIEKITIYVEHPRPIEPPAEPAPPP
PQPLKLTKKEQKKLRTQRRLAREKERQEMIRQGLVEPPKPKVKMSNLMKVLGSEATQDPT
KLEMEIRSAAAEREQAHVDRNIARKLTPDERREKKERKLFDDSNIAPESIVSVYKINDLS
HPQTRFKVDVNAQENRLTGCAVISGGISVVVVEGGKKSIKRYGKLMLRRIDWAAAGKKED
DEGEGEGEGEDEDKPLNKCVLVWQGSVAKSSFHRFFVFDCRTEAAARKVFVDAGVPHYWN
LAVNFKDDEF
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggatagagcttctgagaaagacaaatcaagtagggattacagagacaaacaccgtagc
tccaaggataagcactatgaagatgatcatcgccatcatcaccatcgttcgaagcatcga
tccgaagacggccaccaccgatctgagagagaggggagccgagaaagagctcattatcac
gatagaaaggaggaatccgtggagaaaaagcattcgcataagaggaaagaccgagcagaa
agtgcggatagaagcaatgcggatgacaagagagctagagtttctgacaacaagaaggag
aagaggaggactgaggatgagaatggtagggataagcagagagttgatgatggagattgg
agggataaggatgaggagagaagagagaggaggaggtttgaggataaagcaaaggaggag
gatgtggaagttgatgaagaaaggaggagaggtggatttgaaattacaacttccaagaaa
gagacaaaggaggagccaactgatcatgtccaggatgaggctgttggttccattgctaag
attcctgggaaatctagtacagatgggacagcttctggtgctggcaagagtgggagctta
tctcttgatgctttagcaaaagcgaagagagctttacaaatgcgaaaggagttggctgaa
aagcttaagaagatacctgcactaaacaagaataagggccccaactttactagagaggga
cttccacaggtgggagccaaggagagccttcaaccttcagctaatgcagcgatttttccc
actccagttgcatcttctgatgcaggggtattgctaacacctggttcagcaccaagcaca
tcaaatccaccacccagtggtttgcctcatcttgtggggctcacagcacaaaagtatgaa
gcggtaaagcgtgcacaagagcttgcttctaagatgggattccgacaggacccagaattt
gctcccctcattaacatgtttccagggcaaatgccaccagaggttacccttcagccaaag
cctgcaaaagcccctgttcttcgattggatgccctaggcagggaaatcgatgagcaggga
aatattgtcaatatgcctaagccatctagcacccttaaggtgaacatcaataaaaagaaa
caagaagcatttcaaattctcaaacctgaacttgaggttgatcctgagaaaaatccccat
tttgatccaagcatgggcattgacaagaacaaaattttgaggcccaagaggatgacattt
cagtttgtggaggaaggcaaatggtccagagatgcagaaataatcaagttaaagagccaa
tttggtgaagcaagagccaaagagctaaaggcaaagcaagcacagttgaccaaggctaaa
gcagagcctgacataaatccgaatctcattgaggtatcggaaagggttatcgccaaggaa
aaacagaaggaacctattcctgaagttgagtggtgggatgctcctctgttacgatctggt
tcttatggtgatatagttgatggtaatgtaactaatgagcagttgaagattgaaaagatc
accatatatgttgaacaccctcgccctattgagcctcctgctgaaccagctccacctcct
ccccaaccgttgaaactaaccaaaaaggagcaaaagaaacttcgaacccagcgaagattg
gccagagagaaagaaagacaagaaatgatacgacaaggcctggtagaaccaccaaagccg
aaagttaaaatgagcaatctaatgaaagttcttggctcagaagccacacaggatcctaca
aagcttgaaatggagattagaagtgctgctgctgagcgtgagcaggctcatgtggacagg
aatattgctcgtaagcttactcctgatgagcgtcgagagaagaaagagaggaaacttttt
gatgactcaaatatcgctccagagagtattgtttcagtatataaaattaatgacctctcc
cacccacaaacccgcttcaaggtggatgttaacgctcaggagaatcgtttgactgggtgt
gcagtgatctcaggaggtattagtgttgttgttgttgaaggtgggaaaaaatcaatcaag
cgatatgggaaacttatgcttaggagaattgattgggcagctgctggtaagaaagaagat
gatgaaggtgaaggtgaaggtgaaggtgaagatgaagataagcctctcaacaagtgtgtg
ttggtctggcaaggtagtgttgcaaaatcaagcttccataggttttttgtttttgactgc
aggactgaagctgctgctcgtaaagtttttgttgatgctggggttcctcattactggaat
cttgctgtaaactttaaagatgacgaattttaa

DBGET integrated database retrieval system