Solanum dulcamara (climbing nightshade): 129887404
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Entry
129887404 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129887404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129887404
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129887404
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
HECT type E3
129887404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
129887404
NCBI-ProteinID:
XP_055818460
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All DBs
Position
4:46578787..46614124
Genome browser
AA seq
1030 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRQQNSAAIKIQKCFRGRK
EVEIERSKVRENFLKTHGELCHSVDRQCFSPDSDFLRHLLFFFNPTYTTDVSVLVETCRS
LLEFVRDNGDVVSIFAGTEYASKPALVRYRVKKFVHACIRAVYGNRNKLRDQLFMESEKS
CTSAILLLDAVTLLINLGLPWACSTVTYLLQRNIYSLFREIVLIGKDRSFPASNRVVSSF
ERVLGLITSHIGQNTCTCPSVDPQCCFPSQILTIPYVWRFFPHLKEIFASPSVSRHYFHQ
MKLCMNDHINVLPPDIAIDLPGYACLLGNLLEVAGLAFAQPESFTMAVDFATVTTFLLEA
LPSLQSSNMGSIEMSEDEMVIDDEQTEKVLNLGLEQQITNAIDPRFLLQLTTVLLGGFSP
LNGSLSVHLDENHIAAITAVCAFLHATFNILPLERIMTVLAYRTELVPVLWNFMKQCHGN
QKWSSMSEQSPYLPADAPGWLLPLSVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRCLII
ILRQALWQLLWLNPTVPANFGKATIGIFAMKKHPLEFLQHRVCVVASELLSQLQDWNNRR
QFTPPSEFHADGVNEYFISQAMMENTRANDILKQAPFLVPFTSRAKIFTSQLTEARQRNG
SQGLFARHRFRIRRDHILEDAFNQLNALSEEDLRGLIRVTFVNELGVEEAGIDGGGIFKD
FMENITRAAFDVQYGLFKETADHLLYPNPGSGLIHDQHLQYFHFLGTVLAKAMFEGILVD
IPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEGDVSDLELYFVILNNEYGEQT
EEELLPGGKSIRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKEWIDMFNEH
ELQLLISGSLDGIDIDDLRAHTNYTGGYHKEHYVIDMFWEVVKNFSLENQRKFLKFVTGC
SRGPLLGFKYLEPLFCIQRAGGHASEEALDRLPTSATCMNLLKFPPYRSKEQMEQKLLYA
INADAGFDLS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggtgatccttcgacgaggaagcgagtcgatttgggtggccgcagctcc
aaggaacgtgaccgacagaagcttctagagcagactcgtttagagcggaatcgtcgcctc
tggttgcgtcagcagaactctgctgccatcaaaattcagaaatgcttcagaggtagaaag
gaggtggaaattgaacgttctaaagttcgcgagaatttcttgaaaactcatggggagctc
tgccactctgttgacaggcagtgcttcagtccagattcagattttctgcgtcacctactt
ttctttttcaatccaacatacactactgatgtttctgtccttgtggagacatgccgatcg
ctactagagtttgtccgggataacggggatgttgttagcatctttgctggtacggagtat
gcttccaaacctgccttggtgagatacagagtgaagaaatttgttcatgcttgtattcgg
gctgtatatggaaacaggaataagttgagagatcaactttttatggaatctgagaagtcc
tgtacatcagcaatactcttgttggatgcagtaacattgttgattaatttagggcttcct
tgggcttgcagtactgtcacctatcttcttcaaagaaatatatattccttgtttagggaa
attgttctgattggcaaggatagaagctttccagcttccaacagggttgtatcttcattc
gagcgcgtgcttggactaattacatctcatattggtcaaaacacttgtacttgcccaagt
gttgacccacaatgttgctttccctcccagattcttacaattccatatgtatggcggttt
ttccctcacctaaaagagatctttgcaagtccatcagtgagtcgtcattattttcatcag
atgaaattatgcatgaacgaccatattaatgtcctccctcctgatatagcgattgatctt
cctggctatgcttgccttcttgggaatctattggaagttgctgggcttgcttttgctcag
ccagaatcattcactatggccgttgattttgctactgttacgacttttttgttggaagca
ctcccttctctccaatcatcaaatatgggaagtatagaaatgtctgaggatgaaatggtc
attgatgatgaacaaacagaaaaagttctgaatttgggtttggagcaacagataaccaat
gctatagatccacgctttcttctacagctgactactgtgttacttggtgggttttcgcct
ctcaatggttcacttagcgtccatcttgatgaaaatcatatagcagctattactgcagtt
tgtgctttccttcacgcgactttcaacattttgccgcttgaacgtattatgactgtacta
gcctatcggacagaactagttcctgtcctatggaacttcatgaaacaatgccatggaaat
cagaaatggtcatccatgtcagaacaatcaccatatttgccagcagatgctcctggatgg
ctgctacctttatctgttttctgcccagtttataagcacatgctcatgattgttgataat
gaggagttctatgaacaggagaagccattatctctgaaggatatcagatgtttgattatt
atccttagacaggccttgtggcagctcctctggttgaaccctacagtgcctgctaacttt
ggtaaagcaacaattggtatctttgctatgaagaagcatccgttagagttccttcagcac
agggtttgtgttgtagcatctgaactcctatcacagttacaagattggaacaacagacgg
caatttacacctcctagtgaatttcatgctgatggtgtaaatgagtatttcatatctcag
gcaatgatggagaatactagagccaacgatatactaaagcaagctccattcctggtgcca
tttactagccgagccaaaatatttacttcacaactcactgaagcaagacaaaggaatggg
agccagggtctctttgctcggcatagattcagaattagaagagaccatattctggaagat
gcttttaaccaattgaatgcattgtcggaggaggatctccgtggactgatacgtgtgact
tttgtcaacgaacttggagttgaggaagctggtatagatggtggtgggatattcaaggat
ttcatggagaatattactcgagcagcttttgatgtacaatatggattatttaaggaaact
gcggatcatctactctatccgaatcctggatctgggctgattcatgatcaacacctccag
tattttcattttctggggacggttcttgctaaggcaatgtttgaaggcatccttgttgat
attccatttgcaacattctttttgagcaagttgaagcaaaagtataactatttgaatgat
cttccttccttggatccagaattgtatcgccatctcatcttcctgaagcattacgaaggt
gatgtttcagatcttgagttgtactttgtcattctcaataatgaatatggagagcaaact
gaagaagagctgcttcctggtgggaaaagcatacgtgtgactaatgagaatgtcatcacc
tttattcatcttgttgccaaccatcgtttaaactttcagatccgtcaacaaagttctcat
tttctgaggggcttccaacagctaatacaaaaagagtggattgacatgtttaatgaacat
gaacttcagcttcttatttctggatcactcgatggcattgacattgatgaccttagagct
cataccaattatacaggaggttaccataaggaacactatgttatcgatatgttttgggag
gttgtgaaaaacttttctttggaaaatcagagaaaatttctgaagtttgtgactgggtgt
tcacgaggacccttgctcggatttaaatatttggagccattgttctgtatacagagagcg
ggtgggcatgcttccgaagaagctcttgaccgtctgccgacatcagctacttgcatgaat
cttttaaaatttccaccatacagaagcaaagagcagatggagcagaaattgttatacgcc
ataaatgctgatgctggttttgatttaagctga
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