Solanum dulcamara (climbing nightshade): 129887467
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Entry
129887467 CDS
T09577
Name
(RefSeq) YTH domain-containing protein ECT4-like
KO
K20102
YTH domain-containing family protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129887467
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129887467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
129887467
NCBI-ProteinID:
XP_055818552
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All DBs
Position
4:complement(60084487..60089179)
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AA seq
705 aa
AA seq
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MATVAPPADQAADLLQKLSLDSQKKTLEIREPKKKPSVDSKDIGNDQIQSMDRSVTPLLP
DFMDPTLCYVPNGYPSTAYYYGYDGSGNEWEDYSRFVNPDGVEMPGAYGDNGSLMYHHGY
GYAAYNPYSPATSPVPTVGHDGQLYGAQHYHYPYFQPLPPTSTPYGTAVSPPKGEITTSA
AADQAPLSVDSANGNSNSIANGVKGNTGPTSARPAFQNSSLNTNGSFGRGAFPGGVASGY
QDPRFGFDGVRSPIPWLDGSMFTDGQARPVVGNSITPSFSNGGAVPSSKNQNVHPNIMGL
QHPRPSSGFNTTNGYLNRLYPNKYYGQYGNTFSSGMGFGSNRYDSRITGRGWMAVDNRFK
PRGRGNSFSGYGNENMDGLNELNRGPRGKGSKNQKGFTPVALAVKGQNIPLTVTNDAEKD
KPSLISDREQYNHQDFPVTYTNAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQ
EAHQKSGGCPVFLFFSVNTSGQFVGVAEMAGSVDFNKNVEYWQQDKWIGCFPVKWHIVKD
IPNSLLKHITLENNENKPVTNSRDTQEVKMDQGQQLLKIFKDHVSKQCILDDFEFYEDRQ
KRIQEKKAKQQLFQKQTQVWEGKVSEDKNKENSNSELKSQKPSEVSAVLSKESLPPLHPN
GQVKLAENVSVTKLVDDVKDAKPVILSDKKPVVANGIANGVANTC
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgttgcacctcctgctgatcaagctgcagatttgctgcagaagttgtcatta
gattctcagaagaagactcttgaaattcgagagccaaaaaagaagccttctgtggactcg
aaagacattgggaatgatcagatccaatcaatggatcggtctgtgacccctctgttaccc
gatttcatggatccaactttgtgctatgttcctaatggttatccctctacagcatactat
tatggatatgatggttctggtaatgaatgggaggactattcaagatttgtgaatcctgat
ggagttgagatgcctggagcttatggggacaacgggtcacttatgtatcaccatggctat
ggttatgcagcctataatccatactcgcctgctacttcccctgtcccgactgtggggcat
gatggccagctttatggagcacaacactaccattatccatatttccagccccttcctcca
actagtactccatatggtactgcggtttctccaccaaaaggtgagatcaccacctctgca
gctgctgaccaagcaccattgtctgtggattctgctaatggaaattctaatagcattgca
aatggtgtaaagggaaatactggtcctacgtctgcgaggcctgcattccagaactcatcc
ttgaatactaatggttcttttggacggggtgcctttcctggaggagttgcttctggttat
caggatcctagatttggttttgatggtgtacgatctcccattccgtggctagatgggtca
atgttcactgatgggcaagctaggccagtagtgggtaattctattacaccatcattttca
aatggcggtgctgttccatcatcaaaaaatcagaatgttcatccgaatataatgggcttg
cagcatcctaggccctcgtctggcttcaatacaactaatggatatttgaatagattgtat
cccaacaaatattatgggcagtatgggaatacattcagttctggcatgggctttgggtct
aaccggtatgattctcgcattacgggtcgtgggtggatggcagttgataacagatttaaa
ccaaggggtagaggaaatagtttctctggctacggcaatgaaaacatggatggattaaat
gagctcaacaggggaccaagaggtaaaggatccaagaaccagaagggttttacaccagtt
gctttggcagtcaaggggcagaatatcccgctcactgtaaccaatgatgccgaaaaagat
aaaccaagcttgatatcggacagagaacaatacaaccatcaagacttcccagtgacatat
actaatgccaagttttttatcatcaagtcttacagtgaagatgatgtgcacaaaagcatc
aaatataatgtttgggctagcacaccaaatggcaacaagaagcttgatgctgcataccag
gaggctcatcagaagtctggaggctgtcctgtatttctcttcttctcggtaaacacaagt
ggacagtttgttggtgttgcagagatggcaggatcggttgatttcaacaagaatgtggag
tattggcagcaagacaagtggattggctgttttcctgtcaaatggcacattgtgaaggat
attccaaacagccttttgaaacatatcactctggaaaacaatgagaacaagccagttacc
aacagcagagatacgcaggaggttaaaatggatcagggccaacagctgcttaagatattt
aaggatcatgttagcaagcagtgtatccttgatgattttgagttttatgaggatcgtcag
aagagaatccaggaaaagaaggccaagcagcagctattccagaagcagacgcaggtgtgg
gaaggcaaagtctctgaagataagaacaaagaaaattccaacagcgaacttaaatcccag
aaaccttcagaagtttctgctgttttgagcaaggaaagtttaccgcctcttcatcctaat
gggcaggtcaagcttgcagaaaatgtgtctgttacaaaattagtagatgatgtgaaggat
gcgaaaccagtcattttgtctgacaagaaacctgttgtagctaatgggatagcaaatggg
gttgctaatacatgctag
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