Solanum dulcamara (climbing nightshade): 129887510
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Entry
129887510 CDS
T09577
Name
(RefSeq) DNA topoisomerase 6 subunit B isoform X1
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdul03032
]
129887510
Enzymes [BR:
sdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
129887510
DNA replication proteins [BR:
sdul03032
]
Prokaryotic type
DNA Topoisomerases
129887510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
Peptidase_S3
Motif
Other DBs
NCBI-GeneID:
129887510
NCBI-ProteinID:
XP_055818602
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All DBs
Position
4:complement(67425382..67439734)
Genome browser
AA seq
672 aa
AA seq
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METGGSSESPEVPKKGKSKTPRKPKDSILKQKSPAEFFADNKNIAGFDNPGKCLYTTVRE
LVENALDSAESISELPVVEITIEEIGRSKFNSMIGLADHERRDEALYDDFETAKAREKRL
AKEARHLEIQAKNAALGKKVKDPAATKAAKGREASYYRVTCKDNGRGMPHDDIPNMFGRV
LSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEITSSMNSQNYTSFCRLDIDIHKNVP
HIHVHEKWENKERWHGAEIQIVIEGNWTTYRSKILHYMRQMAVITPYAQFLFQFVSDSPE
KNVTIRFTRRTDIMPPVPLETKYHPSAVDILLIKRLITETSKQTLLQFLQHEFVNIGKSH
AERLIGEMGQYFSPKMSVKSLTPQQIVRIHQLFRQAKFDDPSGDILSPAGEYNLRLGIIK
ELHPDMVATFSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNVFRFANRIPLLFEQGADVVT
RTALKRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEISSAVKTAIQQC
CNQLKSKIVKRIHAREQQERKRNLSKYIPSATAAIYDLLKQTTNVHASKKRRFKDDNVDL
LKQVSVNSVTKDTFREKLAQHVEKVDYEMGLEYATQTGVNEEPREDIYIQSLDEDKNFID
LQSPIFVFRLYH
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagactggaggaagcagtgagagtccagaagtacccaagaagggcaaatcaaaaacc
cctcgaaaacccaaagatagcattctcaaacagaagtctcctgctgagttctttgcagat
aacaagaacattgcgggttttgacaatcctgggaaatgtctttacactactgtgagagaa
cttgttgagaatgctcttgattctgctgaatccatctctgaacttccagttgtagagata
accattgaagagattggcagaagtaaatttaattccatgattggtctggctgaccatgaa
cgaagagatgaagccctatatgatgattttgagacagcaaaggctcgtgagaaaagactt
gccaaggaagctcggcatctagagattcaagcaaagaatgctgctcttgggaagaaagta
aaagaccctgcagctacaaaggctgctaagggtagggaggcatcgtattatagggtgaca
tgcaaggataatggaagaggaatgccacatgatgatatcccgaatatgtttggacgagtt
ttgtctggaacgaagtatggattgaaacagacacgtggaaaatttggtcttggtgcaaag
atggcattgatttggtccaagatgagtaccggacttcccattgagattacatcttccatg
aacagtcaaaattatacctcattctgtaggctggatattgatattcacaagaatgttcct
cacattcatgtacatgaaaaatgggaaaacaaagaacggtggcatggtgctgaaatccag
attgttattgaagggaactggacaacataccgatccaaaatattgcattatatgcgacaa
atggctgtcatcacgccctatgcccaattccttttccaattcgtatcagattctcctgag
aaaaatgtgactataaggttcaccagaagaacagacatcatgcctccagttcctcttgag
accaagtaccatccatctgctgtggacatacttcttatcaaacggcttataacggaaaca
tcaaaacagactcttttgcagttccttcagcatgaatttgtgaacattgggaagtctcat
gcagaacgtttaatcggggaaatgggtcaatattttagccccaaaatgtcagttaaatct
ctaacaccacagcaaatagttcgcatccatcagttgtttcgtcaagccaaatttgatgat
cccagtggtgatattttaagtcctgctggagaatataatctacgtcttggcattataaag
gagctgcacccagatatggttgctaccttttcaggaagtgctcaagtattcgaaggtcat
ccattcattgtggaagctggagttagtgttggtgggaaagatgttaaacaagggctgaat
gttttccgatttgctaatcggattccacttctttttgagcaaggtgctgatgttgttacc
aggactgctttgaagagaatcaattggaacagttacaagatcaaccaaacacaagacaaa
attggtgtctttgtgagcattgttagtaccaaaatcccctttaaagggactggcaaggag
tatattggagacgacataagtgagatatcttctgctgtcaagacagctattcagcaatgc
tgcaatcagctcaaatcaaaaattgtaaaaaggattcatgctcgtgagcagcaggaaagg
aagcgaaatttgagcaagtatattcctagtgctactgctgctatatatgatctcctaaaa
cagacaacaaatgtgcatgcatcaaaaaagagacgctttaaggatgacaatgttgaccta
ctaaaacaagtttcagttaattcagtaacgaaagatacattcagagaaaagctcgctcaa
catgtcgaaaaggtggactacgagatgggtttggaatatgccacacagaccggagtgaat
gaagaaccacgggaagacatatacatacagtcactggatgaagataagaacttcatagac
ctccagagccccatatttgtcttcagactctatcactag
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