Solanum dulcamara (climbing nightshade): 129887630 Help Entry 129887630         CDS       T09577                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism sdul  Solanum dulcamara (climbing nightshade) Pathway sdul03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:sdul00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     129887630  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sdul03019]     129887630 Enzymes [BR:sdul01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      129887630 Messenger RNA biogenesis [BR:sdul03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      129887630 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 SRPRB FtsK_SpoIIIE ATP_bind_1 ABC_tran DUF1611 AAA_29 AAA_24 Motif Other DBs NCBI-GeneID:  129887630 NCBI-ProteinID:  XP_055818771 LinkDB All DBs Position 4:76447491..76462091 Genome browser AA seq 439 aa AA seqDB search MAYGGTNVNPLAATGGSTTVRQVKLEKECELRIEASADSPLRLRLLTGTAEIFGTEIPPG IWLNFPPRLKFAVFTWYGATIEMDGPTETDYTADETPMISYINVHAVLDGRRNRAKASPS DSDTSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCVAATP IELPIDPVEGIPLEMPMVYFFGHVTPSANIDHYKVLVKELALTLETQFSGNAESRASGMV INTMGWIEGVGYELLLHAIDTFNATVILVLGQEKLCSMLKDVLKNRPNVDVVKLQKSGGV VSRNAKVRQKARGYRIREYFYGPSNDLSPHSNVVNFSDLFIYRIGGGPQAPRSALPIGAE PAADPTRLVPVIINLDLLHLVLAVSYAKEQDQIISSNVAGFIYVTDIDLHRKKITYLAPC AGELPSKNLIVGTLTWIEN NT seq 1320 nt NT seq  +upstreamnt  +downstreamnt atggcttatggaggcacaaatgtcaatccattggcagcaacaggcggttcaacaacagtg aggcaggtgaagctggaaaaagaatgtgagctccgaattgaagccagtgctgactcgccc ctccgtcttcggctcctgactggcacggctgagatttttgggactgaaatccctcctgga atctggctcaacttccctccaagacttaaatttgcagtttttacttggtatggagccaca attgagatggacggtcccactgaaactgattatacagcagatgagacgccgatgataagc tatataaatgtccatgctgtacttgatggacgaagaaaccgtgccaaagcttcgcctagt gattctgacacttctcagggcccaagagttattgtcgtgggacctacagattcgggcaag agtactttgtcaaggatgcttcttagttgggctgctaaacagggatggaaacctactttt gtggatttggacataggtcaaggatcgataactattccaggatgtgttgctgctacacca atcgagttgcctattgatccagttgaaggaattccacttgagatgcctatggtctacttc tttggccatgtgactcctagtgccaacatagatcactacaaggtactcgtcaaggagcta gctctgactctggagacacaattttctggtaatgctgaatctcgagcttcaggcatggta ataaatacaatgggatggatagagggagttggttatgagttgctactccatgcgattgat acgttcaatgccacagttattcttgtcttgggtcaggaaaaactttgcagcatgctaaaa gatgttttgaagaatcggcctaacgtggatgtggtgaaacttcaaaaatctggtggtgtt gtatcaaggaatgcaaaagtacggcagaaagcaaggggctacagaatacgggagtatttt tatggcccgtcaaatgatctctcaccacattctaatgtggtgaacttcagtgacttgttc atctaccgaatagggggtggaccacaggctccacgctcagctttacctattggtgcagag cctgctgcagatcctacaagattggttcctgttattatcaacctggacttgctccatttg gttcttgctgtctcatatgccaaagaacaagatcaaataatatccagtaatgttgctgga ttcatctatgtaaccgatatagacttacacaggaaaaagataacataccttgcaccttgt gctggggaacttcctagcaaaaacctaattgtgggaaccttaacatggatcgaaaactga

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