Solanum dulcamara (climbing nightshade): 129887639
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Entry
129887639 CDS
T09577
Name
(RefSeq) serrate RNA effector molecule isoform X1
KO
K27103
serrate RNA effector molecule
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129887639
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
129887639
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
129887639
NCBI-ProteinID:
XP_055818783
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Position
4:76861708..76875635
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AA seq
747 aa
AA seq
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MAEVMDAPAEGLERRRERSKENPNKSTEEPPVSSPPPPPPPPPPRRGRDRDSRERRDDRD
FDRRGGRGDYYDRNRSPPHPPPVRERDYKRGRPSHSPPPPLPPYRDRRGGYSPPHRRSPP
FPPYKRSRRDDYDGRRGSPRGGFGHGDRRYGYDHQGGYEREMGGRPGYPDERHHGRFAGR
SSGGYRGDWGPGRGGFADTFGAGSTQREGLKSYKQFIQELEDDILPAEAERRYQEYKSGY
IEAQKRAYFNAHKDEEWLKDKYHPTNLISVIERRNELARKSAKDFLLDLQSGTLDIGPGV
TPPPTNKSGQSSEPNSDEEADENGKRRRHGRGPTRDTDLLSAAPKAHLVSSDPRRVQIDV
EQAQALVRKLDSEKGMEDNILSRSDNDRGSRDKSHGSTGPVIIIRGLTSVKGLEGTELLD
TLLTYLWRIHGVDYYGLTETNEAKGLRHVRVDGKASDATSNGAEWETKVDSHWQDRLKGK
DPLEVMAAKEKLDAVAAEALDPYVRKIRDEKYGWKYGCGAKGCTKLFHASEFVHKHLKLK
HPDLSVDLTTKVREDLYFQNYMNDENSPGGTPVMLPSVPKEKPLRRRPGLDGRLKDDRGN
RKDRDGRANGGERFDMSENPQSGDFQSNNDGANGGNPDEEMFDTFGGQGIPVAPFPSEMA
PPPVLMPVPGAGPLGPFVPAPPEVAMRMMREQGGPTPFEGGRNGRSGPAGSIIALPPGFR
QDPRRLRSYQDLDAPEDEVTVIDYRSL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtaatggatgctccggcggaaggtttagaacgtcgccgtgaacgaagcaaa
gaaaatccaaacaagtccacggaagagccaccggtatcttctcctccaccgcctcctcct
cctcctccgccgaggcgcggccgcgatagagattcaagggaacggagggatgacagggat
tttgatcgtcgaggtggtcgtggggactattatgatcgtaaccggtctcctcctcatcct
ccgcctgttcgagagcgtgactacaaacgtggacggcctagccatagccctcctcctcct
cttcctccttatcgagaccgccgtggtggatattctcctcctcatcgccgttcgcctcca
tttccaccttataagcgctcgcgtagagatgactatgatggccgccgtggaagccctaga
ggtggtttcgggcacggcgatcgaagatatggttatgaccatcaaggcggttatgagcgt
gagatggggggtagacctggttatcctgatgagaggcatcatggacgatttgcaggacgc
tcgtcaggtggctatagaggtgactggggccctggtcgtggaggatttgcagatactttt
ggcgcagggagcactcaaagagaggggttgaagtcttataagcaattcattcaggagctt
gaagatgatatcttgccagctgaagccgagcgcaggtaccaagaatacaagtctgggtac
atagaagcacaaaaaagagcttattttaacgctcataaagatgaagaatggttgaaagac
aaataccatccgacaaacttaatttctgttattgaaaggaggaatgagcttgcaaggaaa
tcggcgaaggatttcttacttgatttgcagagtggaactttagacataggtcctggtgtt
acaccacctcctacgaacaaatcaggacagtcaagtgagccaaattccgatgaagaagca
gatgaaaatggcaaaaggaggcggcatggaaggggacccactagagacaccgacttactt
tcagctgctccaaaggctcacctagtgagttctgatcccagaagagtccagattgatgtt
gaacaagcacaggcgcttgtgaggaagcttgactcggagaagggaatggaggataacata
ttatctcggtctgataatgataggggaagcagagacaagtctcatggttccacaggccca
gttattatcataaggggtttaacttcagtaaaaggtcttgagggaactgaactacttgat
acacttctaacctacctgtggcgcattcatggggtggattattatggcctgacggagaca
aatgaagctaagggtcttcggcatgtgagggttgacggcaaagcttctgatgcaacaagc
aatggagcagagtgggaaacaaaagtagattcacattggcaagacaggctgaaagggaag
gatcctttggaagtaatggctgcaaaggaaaaacttgatgctgttgctgctgaagcctta
gatccctatgtccgtaaaattagggatgagaagtacggctggaagtatggttgtggagcc
aagggttgtacaaagctcttccatgcgtctgaatttgtccataaacatttaaagctgaaa
caccctgatctgtcagtggatctgactactaaagtgcgtgaagatttgtacttccaaaac
tatatgaatgatgaaaattctcctggtgggactcctgtaatgctgccatctgtgccgaaa
gagaagccactaaggcgccggcctgggctagatggccgactgaaggatgacagagggaac
cgtaaagatcgggatggacgtgctaatggtggtgaaaggtttgatatgtctgaaaatcca
caatctggggattttcagtccaataatgatggtgccaatggggggaatcctgatgaagaa
atgtttgatacttttggtggacaaggaattccagttgctcctttcccttcagagatggct
cctccaccagtattgatgcctgttcctggtgctggtcctcttggtccgtttgttcctgcg
cctcctgaagttgcaatgcgaatgatgcgagagcaaggaggccctactccttttgaaggg
ggtagaaatgggaggtctgggccagcaggctcgataattgctttacctcccggatttcga
caggatcctcgtcgtttgcgaagctatcaagatcttgatgcgcctgaagatgaagttact
gtgatagattacaggagtttgtag
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