Solanum dulcamara (climbing nightshade): 129887653
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Entry
129887653 CDS
T09577
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129887653
03036 Chromosome and associated proteins [BR:
sdul03036
]
129887653
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129887653
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129887653
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
129887653
microRNA pathway
RISC loading complex
129887653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
129887653
NCBI-ProteinID:
XP_055818805
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Position
4:complement(77021335..77029735)
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AA seq
908 aa
AA seq
DB search
MAEEGTNGAAEGLPPPPPVPPDFTPAKSELEPVKKKVLRVPMARRGVGNKGQKIQILTNH
FKVNVTNVDGHFFHYSVALFYEDGRPVDGKGVGRKVLDRVHETYDTELAGKEFAYDGEKS
LFTIGALPRNKMEFTVVLDDVTSNRNNGNSSPGGHGSPNEADRKRLRRPYQSKTFKVELS
FAAKIPMQAIANALRGQESENSMEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFVDV
GAGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKAK
RILKNLRVKTSPTNQEYKITGLSDRPCREQLFTLKQKGKDADGEVQTTEVTVYDYFVNHR
NIELRYSADLPCINVGKPKRPTFFPIELCSLVSLQRYTKSLSTFQRSSLVEKSRQKPQER
MQVLSNALKINQYDAEPLLRSCGISISSNFTQVEGRVLPPPKLKTGGDDFVPRNGRWNFN
NKRLVDPTKIERWAVVNFSARCNIQGLVSDLIKCGKMKGIMVEDPFDVFEESPQVRRAPP
LVRVEKMFEQVQSKLPGAPKFLLCLLPERKNCDVYGPWKRKNLAEYGIVTQCIAPTRVND
QYITNVLLKINAKLGGLNSMLTVEHSPAIPMVSKVPTIILGMDVSHGSPGQSDVPSIAAV
VSSRQWPSISRYRASVRTQSPKVEMIDNLFKRVSDTEDEGIMREALLDFYVSSGKRKPEH
IIIFRDGVSESQFSQVLNVELDQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPNDPNN
VPPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLYDELGFSADDLQELVHNLSYV
YQRSTTAISVVAPICYAHLAATQMGQWMKFEDASETSSSHNGVTNAGPVSVPQLPKLEEK
VSSSMFFC
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaggcacaaatggagcagcagagggtctgccacctcctccccctgttcca
ccagatttcactcctgcaaaatcagaactagagccagtgaagaaaaaggtcttacgtgtt
cccatggccagacgaggagttggaaacaagggacagaagattcaaatccttacgaatcac
tttaaagtgaatgtgaccaatgtggatggtcacttctttcactacagtgttgccctattc
tatgaagatggtcgaccagtcgatgggaagggagttggaaggaaggtcttagaccgagtg
cacgaaacttatgatacagaattagctggaaaggaatttgcctatgacggtgaaaaaagc
ttgtttaccattggagcactccctcggaataaaatggagtttactgttgtcctagatgat
gtgacatcaaataggaacaatggtaatagcagccccggtggacatggaagtcccaatgaa
gctgacaggaagaggttacgtcgtccttaccagtcaaaaactttcaaggtggagctcagt
tttgctgccaaaatcccgatgcaggcgattgcaaatgctctacgtggtcaagagtcggag
aactctatggaagccttgagagtcttggatataattctgaggcagcatgctgcaaagcag
ggttgcctgcttgttcgacaatcctttttccacaatgatccaaagaactttgttgatgtc
ggtgctggtgttcttggttgtcgaggattccattccagcttccggactacccagagtggc
ttgtctttgaacattgatgtgtctacaacaatgattatccagcctgggcctgtcgtggac
ttcttgattgcaaatcaaaacgcgaaggatcctttttcactggattgggcaaaggcaaaa
cgtatactcaagaatttgagggtgaagacgagccccactaatcaagagtacaagattact
ggattgagcgaccggccttgtcgtgaacaactgtttaccctgaagcagaaaggaaaagat
gcagatggtgaggtccaaacaactgaagttactgtgtatgattactttgtcaaccaccgc
aacatagagttgcgttattctgctgatttaccatgcataaatgttgggaaaccaaaacgt
cccacctttttcccaattgagctatgttctttggtgtcattacaaagatacacaaaatcc
ttgtccacattccagaggtcttcactagtggagaaatcaaggcaaaagcctcaggagagg
atgcaagtcttaagcaatgctctcaaaatcaaccaatatgatgctgagcctctgcttcgt
tcctgtggaatatcgattagcagtaactttactcaggttgaaggacgtgttcttcctcca
ccaaagttgaagacaggtggtgatgacttcgtccctcgtaatggcagatggaatttcaat
aataagagactagttgatcccacgaagatagaacgctgggccgttgtcaatttttctgct
cgctgtaacatacaagggctagtcagtgatctgatcaaatgtggaaaaatgaaaggaatt
atggtggaagatccatttgatgtttttgaggagtcgccacaagtcagaagggctccacca
cttgttagagttgagaaaatgtttgaacaggtccaatctaagcttcctggggcacctaaa
tttctgctttgtctgcttcctgagaggaaaaactgtgacgtatacggaccatggaaacga
aagaatcttgctgagtatggcattgtgacccagtgtatagctccaacaagagtcaatgat
caatatatcaccaatgtgctcctgaagataaacgcaaagcttggaggtttaaattctatg
ctaactgttgaacattctcctgcgatccctatggtatctaaggtccctaccattattctt
gggatggatgtgtcccatggctctcctggccaatctgatgtcccatcaattgcagcggtt
gtcagctcaaggcagtggccttcgatttctcgttacagagcttcagttcgtactcagtct
cctaaagtggagatgatagacaacttatttaaacgtgtttctgacactgaagatgaggga
ataatgagggaggctttgcttgatttttatgtgagctctggtaaaaggaagcctgagcat
ataataatattcagggatggtgtcagtgagtctcagtttagtcaagttctgaatgttgaa
ctggaccagattattgaggcttgtaaatttcttgatgaaaagtggtcacccaagtttgtg
gtgatagttgcccagaagaatcatcataccaagtttttccagcctaatgatcctaacaat
gttcctccaggcacaatcatagacaacaaagtctgtcacccgaggaattatgacttctac
ttgtgtgcccatgctggaatgattggtacaactcgtcctacacactatcatgtcttgtat
gatgaattgggtttctctgctgatgatcttcaagagcttgttcataatctctcttacgtg
taccagagaagcaccactgctatatctgttgttgcccccatctgttatgctcatctggct
gcaacgcaaatgggacagtggatgaaatttgaagatgcatcagagacttcctcaagccat
aatggagtaaccaatgctggaccagtttccgttcctcagcttccaaagctggaggaaaaa
gtttccagctctatgttcttttgttga
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