Solanum dulcamara (climbing nightshade): 129887703
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Entry
129887703 CDS
T09577
Name
(RefSeq) transcription factor E2FA isoform X1
KO
K06620
transcription factor E2F3
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129887703
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
129887703
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Paralog
GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
SKA1
KLRAQ
TrmB
Mei5
DUF2250
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
129887703
NCBI-ProteinID:
XP_055818875
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Position
4:complement(78078005..78083200)
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AA seq
478 aa
AA seq
DB search
MTGSGASTGAAAPPSAQSSSAAVNGGGRTQISHPIKRYLPFASMRPPFVTPEDYHRFSIP
GVDSRIGSASLQPEAIVVKSPALKRKTGYIKEAESSDWTANSGYVDVANSPLATPVSGKG
GRAHGRSRASKNNKSGTQTPVYNAGSPSPLTPASCRYDSSLGLLTKKFINLIKHAEDGML
DLNQAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGVDSSRSGEVDNDAAILKAE
TDSLSMEERRLDERIREMQEKLRDMSEDENNQKWLFVTEDDIKSLPCFQNETLIAVKAPH
GTTLEVPDPDEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEMNGVEPSTAIPVASS
SGSKDYPVMEISTVSNSVTENEGQTQNVDQLSSDLGTSQDYSGGMMKILPSDVDNDADYW
LLSDANVSITDMWKTDSAVEWDGETLLRDFGIDDLGTPRAHTPSTTADVPAPMSVPPR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaggttctggtgcatccactggtgcggcggcgccaccgtctgctcagtcatcatcc
gccgctgtaaatggtggagggaggactcagatctcccatccgatcaaaagatatttaccc
tttgcttctatgaggccgccgtttgttacacctgaggattaccaccgattttctatccct
ggtgttgattcaagaattgggtccgctagtttacagcctgaagctattgttgttaagtct
cctgcactaaagcggaagacaggctatattaaagaagctgagtccagtgactggaccgct
aattccgggtatgtagatgtggccaatagtccacttgcaacgcctgtgtctggaaaagga
ggaagagcacatggacggtcaagagcctcaaaaaataataaatctggaactcaaactcct
gtctacaatgctggttctccttctcctcttacacctgcaagctgccgctacgacagttca
ttgggtcttttaaccaagaaatttatcaacttgatcaagcatgctgaagatggtatgctt
gatcttaaccaagctgcagacactttggaggtgcagaaaagaaggatctatgatataaca
aatgtgcttgaaggaattggtcttattgaaaagaagctcaagaacagaatacaatggaag
ggtgttgattcttctagatctggagaagtggataatgatgctgccattttaaaggctgaa
actgacagcctttcaatggaggagcgaagactggatgagcggattagagaaatgcaagaa
aagttaagggatatgagtgaagacgaaaacaaccaaaagtggctttttgtaactgaagac
gatataaagagcctaccttgctttcagaatgagaccctaatagcagttaaagctcctcat
ggcaccaccctggaagtcccagaccccgatgaggccgtggactatccacagaggagatat
agaattatactcagaagcacaatgggtcccattgatgtctaccttgtcagtcaatttgag
gagaagtttgaggagatgaatggtgttgaaccgtcaacggccatcccagttgcttcaagt
tcaggctcaaaggattatccagtcatggagatatcaactgtttcaaacagcgttactgag
aatgaaggacaaacacaaaatgttgatcaattgagttctgaccttggtacttcacaggat
tacagtggtggaatgatgaagattctcccttcagatgttgataatgacgcagattattgg
ctcctatcagatgcaaatgttagcatcacagatatgtggaagacagattctgcagttgaa
tgggatggggaaaccttgctccgtgattttggaatagatgatctaggcaccccacgggca
cacactccatctactactgctgacgtaccagctccaatgagcgtgccaccaagatga
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