Solanum dulcamara (climbing nightshade): 129887714
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Entry
129887714 CDS
T09577
Name
(RefSeq) coatomer subunit beta-2
KO
K17301
coatomer subunit beta
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129887714
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129887714
Membrane trafficking [BR:
sdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129887714
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129887714
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
129887714
NCBI-ProteinID:
XP_055818888
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All DBs
Position
4:78345674..78355365
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AA seq
949 aa
AA seq
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MEKSCSLLVHFDKGTPALANEIKEALEGNDIPAKIDAMKKAVMLLLNGETLPQLFITIIR
YVLPSEDHTIQKLLLLYLEIIEKTDSKGRVLPEMILICQNLRNNLQHPNEYLRGATLRFL
CRLNEVDIIEPLIPSIMNNLEHRHPFVRRNAILAVMSVYKLPHGEQLLVDAPEKIENVLT
NEQDPSAKRNAFLMLFQCAQERAINYLLTHVDRVSDWGELLQMVVLDLIRKVCRTNKAEK
GRYIKIIISLLTAPSAAVTYECAGTLVSLSSAPSAIRAAANTYCQLLQSQSDNNVKLIVL
DRLNELKSSHKDVMVDMIMDVLRALSSPNLDIRRKTLDIVLELITPRNINEVVLTLKKEV
VKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLSDSNVASAIDVVVFVR
EIIETNPKLRVSIVTRLLDTFYQIRAARVCSCALWIIGEHCLSLSEVESGIATIKQCLGD
LPFYSVSEESEATDSSKKSQQANSITTVSSRRPAVLADGTYATQSAASETAFSPPTVVQG
SLTTGNLRSLLLTGDFFLGAVVACTLTKLILRQEEVQPSKVEVNKATANALLIMVSMLQL
GQSYVLPHPIDSDSHDRIVLCIRLLCNTGNEVRTIWLSSCRESFVNMLSDKQLRETEEIK
AKAQTSHSQPDDLIDFYHLKSRRGMSQLELEDEVQDDLKRATGEFVKDENDANKLSRVLQ
LTGFSDPVYAEAYVTVHHYDIVLDVTIINRTKETLQNLCLELATMGDLKLVERPQNYTLA
PESSKQIKANIKVSSTETGVIFGNIVYEASNVLERTVVVLNDIHIDIMDYISPAVCSEAA
FRTMWAEFEWENKVAVNTVIQDEKGFLDHIIKSTNMKCLTAPSALEDECGFLAANLYAKS
VFGEDALVNLSIEKQSDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcctgctcgttgctggtacattttgataagggtacaccagctcttgccaat
gagatcaaagaagcacttgaaggaaatgatatacctgccaagattgatgctatgaagaaa
gcagtaatgcttttattgaatggagaaaccctacctcagctctttattactattattaga
tatgtcttgccttctgaagatcacacaattcaaaaactgttgcttttgtatttggagatc
attgagaagacagattctaaggggcgtgtgctgcctgagatgattctaatctgccagaac
ttgaggaataatttgcagcatccgaatgagtaccttcgtggagctactctgagatttctt
tgcaggctgaatgaggtagatataattgaacctctaattccatcaattatgaacaacttg
gagcaccgacatccatttgtgaggaggaatgcaattcttgctgtgatgtccgtttacaag
ctcccacatggtgagcagctcctggttgacgcaccagagaagattgagaatgtcctaacc
aatgagcaggatccatcggctaagaggaatgcgtttctgatgctcttccaatgtgctcag
gagcgtgccatcaattacctcttgactcatgttgatagagtgtccgattggggggagtta
cttcagatggttgtattggatttgattcgaaaagtttgcaggacaaacaaagcggagaaa
gggaggtatatcaaaattatcatatcattgctaactgccccttctgctgctgttacatat
gaatgtgctggaactcttgtttctttatcttctgccccaagtgctataagagctgcagcc
aacacctactgtcaacttcttcaatctcaaagtgacaacaatgttaagcttattgtgctt
gatcgactgaatgaattgaaatcttcgcataaggatgtcatggttgatatgataatggat
gtccttagagcactttcgagcccgaatcttgatatccgtagaaaaacactggacattgtt
cttgaattgatcactcccaggaatatcaatgaggttgttctcacactgaagaaagaagtt
gtgaaaactcaaagtggtgagcttgagaaaaatggtgagtaccgccaaatgctcatccaa
gccattcattcatgtgccataaagtttccagaagtggcaagcactgtggtccatctattg
atggacttcttgagcgacagcaatgttgcttccgcaattgatgtggtcgtttttgtccgg
gagattattgaaacaaacccaaaattaagggtttccattgtgacaaggctattagacact
ttctaccaaattcgagcagcccgtgtttgttcctgtgccctttggattattggagagcat
tgtctatctctctctgaagttgagagtggcattgcaactatcaagcagtgccttggagac
ctaccattttactcagtttctgaggaaagtgaagctactgattcttcaaaaaagtctcag
caagcaaactccattactactgtgtcatctagaagaccagctgtacttgctgatgggaca
tatgctactcaaagtgctgcatctgaaactgctttctctcctccgacagttgttcaagga
tctttaaccactggaaacctgagatcccttcttctcactggtgatttcttcctgggagca
gttgttgcttgtacactgactaagctcattctgaggcaggaagaagttcaaccatcaaaa
gttgaagtgaacaaagcaacagcaaatgcattactgatcatggtctcaatgctacagctt
gggcagtcttatgttcttcctcacccaattgacagtgattctcatgacagaatagttctt
tgcataagattgctttgtaatacgggtaacgaggttaggacgatctggttgagctcttgt
cgcgagagttttgttaatatgctttctgataaacaactacgagagacagaggagatcaaa
gcaaaggcacaaacttctcactcccagccagatgacctcattgatttctaccatttgaag
agtaggaggggaatgagccagctggagttggaagatgaagttcaggatgatttgaaacgt
gccactggagaatttgtcaaggacgagaatgatgctaataagctaagccgggtactgcag
cttacaggatttagtgatcctgtttatgctgaagcatatgtgacagttcatcattatgac
atcgtcctagatgttaccataataaatcgaaccaaagagacacttcagaatttatgtttg
gaactggcaacaatgggtgatcttaagctcgttgagcgtccacagaattatactttagct
cctgagtcaagcaagcagataaaagctaatatcaaggtgtcttctactgagactggagtg
atttttggtaacattgtctatgaggcttcaaatgtgcttgagcgaactgttgttgtgctc
aatgatatccatattgacatcatggattacatctctcctgctgtttgcagtgaggctgct
tttagaactatgtgggctgaatttgagtgggaaaacaaggttgctgtcaacactgtcatt
caagatgaaaaaggatttcttgaccatattatcaaatcaaccaacatgaagtgcctgact
gcaccatctgctctggaagatgaatgcgggttccttgctgctaacctttatgcaaagagt
gtgtttggagaggatgctttggtgaatttgagcattgaaaagcaatcagatggtaagctg
agtggttatattaggataagaagcaaaacacaaggaattgctcttagcttgggagacaag
ataacactcaagcagaagggaggcaattga
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