Solanum dulcamara (climbing nightshade): 129887748
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Entry
129887748 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129887748
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129887748
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129887748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_6
PI31_Prot_N
RING_XB3-XBAT31
zf-Nse
Motif
Other DBs
NCBI-GeneID:
129887748
NCBI-ProteinID:
XP_055818935
LinkDB
All DBs
Position
4:complement(78847329..78853713)
Genome browser
AA seq
368 aa
AA seq
DB search
MDDELNKAESHITSAAAFVEGGIQDACDDACSICLEAFCESDPSTLTSCKHEFHLQCILE
WHQRSSNCPMCWQPLSLKDPTSQELLEAVEQERNFRFNQARNASVFRRPTLFTTGMSESE
LEERIIQHLAAAAAMGRGHNFGQREGSRNRSSSHGRPHFLVFSTHHDPSPTAAAVSASVA
PTESDSRQAIADPSVLRETAQFLPHLSSNQSNQLSASSSRYVRPQTVKQEISVGDRSSSS
TSLTENQDTAEPSDIQSLPESWKSRFNSLSMKYRESISKSTQGWKERLFSRSTSMADIGS
DVRREVNAGIANVSRMMERLETRENPTDNNILDPSNTEQRHNDNMVAHNGSRLNENNSTT
FPASTARN
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagctcaataaagcggagagtcatatcacatcagctgcagcttttgtagaa
ggaggaattcaagatgcctgtgatgatgcatgcagcatttgtctggaggctttctgcgaa
agtgatccttcaacgcttacaagctgcaagcatgagtttcatctccagtgcatcctagaa
tggcatcagagaagttctaattgcccaatgtgttggcagcccctaagtctgaaagatcct
acaagtcaagaattgctcgaggctgtggaacaagagaggaattttaggtttaatcaggca
agaaatgctagtgtgttccgtcgtcctactctgtttaccacggggatgagtgagtctgaa
ctcgaagagcgcattattcagcatttggctgctgctgcagcaatgggaaggggacacaac
tttggtcaacgagagggctcaagaaatcggtcatcttcccatggtcgtccgcatttttta
gtgttttcaactcatcatgatccatctcctactgctgctgctgtttcagcttccgttgct
cctactgaatcggattctcgtcaagctatagctgatccttctgtcctccgtgagactgca
caatttttgcctcacctctcatctaatcaaagtaatcaactttccgcttcatcatcccga
tatgttcgcccacaaaccgttaaacaagaaatatctgttggcgatagaagctcttctagt
acatctttgacagaaaaccaggatacagcagaaccatcagacattcagtcattaccggaa
tcctggaaatctcgatttaattcattatcaatgaaatatagagaatccatttcaaagagt
acacaagggtggaaggaaagattgttttctcgaagtacttctatggcagatattggttcc
gatgttaggagagaggttaatgctggaatagctaatgtatctcgcatgatggaacgcctc
gagacacgagaaaatccaacggacaataacatactggatccttcaaataccgagcagaga
cacaatgataatatggttgctcataacggaagcagattgaacgaaaataattctacgact
tttcctgcaagtacagctcggaattaa
DBGET
integrated database retrieval system
