Solanum dulcamara (climbing nightshade): 129887811
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Entry
129887811 CDS
T09577
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00270
Cysteine and methionine metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
129887811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129887811
03032 DNA replication proteins [BR:
sdul03032
]
129887811
03036 Chromosome and associated proteins [BR:
sdul03036
]
129887811
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sdul02048
]
129887811
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
129887811
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129887811
DNA replication proteins [BR:
sdul03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
129887811
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129887811
Prokaryotic defense system [BR:
sdul02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
129887811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Motif
Other DBs
NCBI-GeneID:
129887811
NCBI-ProteinID:
XP_055819015
LinkDB
All DBs
Position
4:79892922..79902792
Genome browser
AA seq
851 aa
AA seq
DB search
MPSKRKASPAESPESKRHAVVEKVDRPEGFPVECCDDDEFVEDEDIVCDSLNDESSDQKN
VRRVVVQANEDQECVFSGETVLDNEAREKWPHRYIIKDKVKANGAPMSLNCQDDSNQLIQ
AKCHFTQALVDDQIYKLGDDAYVKAADGEDDYICKIVEFFQSVDDTKYFTAQWFYRAKDT
VIKAHDQFIDNKRVFLSEIKDDNPLDCLVKKINVVPVPSNVSLQFKESLRSKSDYYYDMK
YLVPFSSFISLPSDVSNPDSESDSTISSDSDVVEVNEHKQENKLLDLYSGCGGMSTGLCL
GADVCGVKLVTKWTVDLNRYACDSLKVNHPETEVRNESASDFLLLLKEWEQLCASCSLLK
SNTTAHPMLKVGDVDDDEEDDDDGASEDGGSGDNEEGEIFEVEKILEVCYGDPNEIKKPG
LYFKVRWKGYGPDEDTWEPIEGLDGCQKKIKDFVTKGFKASLLPLPGEVDVICGGPPCQG
ISGFNRFRNSANPLQDPKNKQLEVFMGIVEFLKPRFVLMENVVDLLRFAHGYLGRYALSR
LVGMNYQARMGMMVAGAYGLPQFRMRVFMWGALPSEKLPQYPLPTHNVIVRGGIPTEFEL
NAVEYEEGQQVKLKRELLLEDALSDLPPVENNEPRDEMPYKDEPKLDFQSFIRSRRDGTL
GTVLYDHRPLQLNDDDYQRVCQIPKRKGANFRDLPGVRVRADNVVEWDPDVERVKLTSGK
PLVPDYAMTFVRGTSQKPFGRLWWDEIVSTVVTRAEPHNQAVLHPVQNRVLTIRENARLQ
GFPDYYKLTGPIKERYIQVGNAVAVPVARALGYSLALALKGLSGEQPLLTLPPNFPCLEE
LVSNEESLDKL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaaacggaaagcttcaccagcggagtcaccggaatctaaacgacatgcagta
gtggaaaaggtggatcggccagaaggttttcctgttgagtgttgtgacgacgatgagttt
gtagaagatgaggatattgtatgtgatagtttgaacgatgaatcgtctgatcagaagaat
gtgagaagagttgttgtgcaggcgaatgaggatcaggaatgtgttttttccggcgaaact
gttctggataatgaagctagggagaaatggcctcatcgatacattataaaggataaggtg
aaagcaaatggtgcacctatgagcttaaattgccaagatgattccaaccaattaatccag
gccaagtgccattttactcaggcattggttgacgatcagatttataaactcggggatgat
gcgtatgtaaaggctgcagatggtgaagatgattatatatgcaagattgttgaatttttt
caatctgttgatgatacaaagtattttactgctcaatggttttacagagccaaggatact
gtaattaaagctcatgaccagtttattgacaacaagcgtgtattcttatcagaaattaag
gatgacaaccctcttgattgccttgtaaagaaaatcaacgttgttccagtaccctcaaat
gtaagcttacagttcaaggaaagtttgcgatcaaaatctgactattactatgacatgaag
tacctggtcccattctcatcatttattagcttaccatcagatgtttcaaatcctgatagt
gaatcagattctaccatatcaagtgacagtgatgttgtagaggtcaatgaacacaagcag
gaaaataagctcttggatctctattccggttgtggtggaatgtccactgggctgtgcctg
ggtgctgatgtttgtggtgttaaacttgtcactaaatggactgttgacctaaatcgatat
gcttgtgatagcttaaaagtgaaccacccagaaacggaggtaaggaatgagtctgcttca
gatttcttattgcttttaaaggagtgggagcagctttgtgcatcctgctccttgttgaaa
agcaataccacagcccaccctatgctgaaagtaggagatgtggatgatgacgaggaagat
gacgatgatggtgcaagtgaggatgggggatctggtgacaacgaagaaggtgaaattttt
gaggtggaaaagattttagaagtttgttatggagacccaaatgaaataaagaagcctggc
ctttactttaaggtacgttggaagggttatggaccggatgaagacacttgggagccgata
gaaggcttagatggttgccagaaaaaaataaaggactttgtgaccaagggcttcaaagca
agtcttttgccattacctggggaagtagacgtcatatgtgggggccctccttgccagggc
ataagtggatttaatcgttttaggaactcagcaaatccattacaagacccgaaaaataaa
caacttgaagtattcatgggcattgtggagttcttgaaacccaggttcgtgttaatggaa
aatgtggtggacttgctcaggtttgcacatggttaccttggaagatatgcactgagcaga
cttgttggaatgaactaccaagcacggatgggaatgatggttgctggggcatatggactt
ccacaatttcgtatgcgtgtcttcatgtggggtgctcttccttcagagaaattgccacaa
tatccattgcccacacataacgttattgtgaggggtggcattcccacagaatttgagtta
aatgcagtagaatatgaagagggacagcaggttaagctaaagagagaacttcttcttgag
gatgcactttcagatcttcctcctgtggaaaataatgagccaagggacgaaatgccatat
aaggatgagccgaaattggacttccagagtttcataagatcaaggagggatggtactttg
ggtactgttttgtatgatcatcggccccttcaattaaatgatgatgactaccagcgtgta
tgtcaaattccaaaacggaagggtgcgaacttcagggacttgcccggggttcgtgttcgt
gctgacaatgttgttgaatgggatccagatgtggaaagagtaaagcttacttcgggaaag
cctttggtccctgactatgcgatgacttttgttcgtggtacttcacaaaagccatttggt
cgtttatggtgggatgaaatcgtttcaacggttgttacaagagcagagccccacaatcag
gctgtattacatccagtgcagaacagagtgctcactatccgtgaaaacgcacggctgcaa
ggtttccctgattactacaaattgactggaccaataaaagaaaggtacatacaagttgga
aatgcagtggcagtaccagttgcccgggctttagggtattctttagcattggcattgaaa
ggattgtcgggagagcaaccattactgacattgccacctaattttccatgtctagaggaa
ctggtctccaatgaagagtctctagataaactataa
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