Solanum dulcamara (climbing nightshade): 129887813
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Entry
129887813 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 2
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129887813
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129887813
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
129887813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
DUF4763
CCDC39
RING_XB3-XBAT31
zf-RING_UBOX
TPR_MLP1_2
HIP1_clath_bdg
CC_Liprin_beta
zf-RING_6
IMS
zf-tcix
zf-rbx1
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
129887813
NCBI-ProteinID:
XP_055819018
LinkDB
All DBs
Position
4:79949122..79962352
Genome browser
AA seq
883 aa
AA seq
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MENSAAASDEPQKKRPHLNSVFSSPTMARHSKTSSDNKAVDAAVLQYQNQKLVQQLDAQK
HKLHDLEAKMKELRDKQASYDDFLVTLNRIWNQLDDDLIILGARCMADQIALQSLDHQDY
SGGLIPSCPAEEIFLCRVLKTNAIPGNANDGSIVNIREALDLRHSSTLELMKSLENAIDA
QRIRTKNFAHLLEGKSSAEDAIIILSKIDDMMKEEANYLHRVIDVLHLKHKEYANEIEAC
NQRQSADQSELKRLEGELEESMTELEDSRRKLVTLKMQKDVACGGQETIPSAVNGSMSPE
KHTDRTKGLRELKESIEEAKILKEDRLSELQDAQEDNLHLLKQLQDLQNELKDDRYVSSS
RAYTLRNDQLHHWNSEAERYKALADSLQADRSFIGRREKELVVKAEAVDAAKKAVDNSES
RIEELEHHMHRFIIEKNELEIKMEEAIQDSGRKDIKEEFQIMGSALSKEIGMMEAQLNRW
KETAQEAVSLREERQSLEASLGRKANEHKDLIGKCAHQTGEIRTLKELAEKMQRDNLERE
IFLDMFGQQIYDNRDISEIRDSEKRAHSQAEILRAALNEHDLELRVKAANEAESACQQRL
SAAEEEIAELRAELDASDRGVLELTEAIKIKEGEAETYISEIETIGQAYEDMQTQNQHLL
QQLAERDDYNIKLVSESVKIKQEQSLLLSRKKVLTAQLQQSKTSLESLKTGIAQIEDQMK
VHITEALSYTQEDRHLALLLETAKRELGDADKELKWLRSAASSSEKEYEQLQRKLGEIQM
ERVTERSEKKKLDEELVELSNTVDELTSASGEAAVQRLQDEINDSKAILKCGVCLDRPKE
VVITKCYHLFCNPCIQRNLEIRHRKCPACGTAFGQSDVRFVKI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggagaactctgctgctgcatctgatgaacctcagaagaagcgtcctcatctcaactct
gttttctcctcaccgaccatggctcgccattcgaaaacttcttctgataacaaagctgtt
gatgctgcagttctccagtatcaaaatcagaaactagtacaacagttagatgcacagaag
cataagttgcacgatcttgaagccaaaatgaaagaattaagggacaaacaagcttcttat
gatgacttcttggttacattaaatcggatctggaatcagctagatgatgatctgattatc
cttggggcacgctgtatggcagaccaaattgctctgcaaagcttggatcatcaagattat
tctggaggtttaattccatcatgtcctgcggaggagatattcctgtgtagggtgttgaaa
accaacgccattccaggcaatgccaatgatggatccattgtgaatatcagagaagctctt
gatctacgtcactcttctactcttgaattgatgaaatcgttggaaaatgctattgacgct
cagcgaattagaaccaaaaattttgctcatcttttggaaggaaagtcatccgcagaagat
gctatcattattctcagtaagattgatgatatgatgaaagaagaggctaattatctccat
cgagtgattgatgttcttcatttgaaacacaaagaatatgccaatgaaattgaagcttgt
aatcaaaggcagtcagcagatcaatctgagttaaaacgtcttgaaggtgagctggaggaa
agcatgaccgaacttgaagatagtagaaggaagctagttactttgaaaatgcagaaagat
gtggcatgtggggggcaggaaacaattccaagtgcagttaatgggagtatgtcacctgag
aagcatacagaccgaacaaaaggtttgcgagagctaaaggagtctatagaagaggcaaag
atactgaaagaggatcgcctctctgagcttcaagatgcccaggaagacaatctacatttg
ttaaagcagttgcaagatcttcagaatgaactaaaggacgatagatatgtgtcctcatct
cgtgcttataccttacgcaatgatcaacttcaccattggaattctgaggcagaacgatac
aaagctctggcagactctcttcaggctgacaggtctttcatcggacgaagagagaaagaa
ctggttgtaaaagcagaggctgtggatgcagcaaagaaagcagttgataactccgagtca
aggattgaggaattggagcatcacatgcacagattcataattgaaaagaatgagctggaa
atcaaaatggaagaagctattcaagattcaggaaggaaagacattaaagaggagtttcag
ataatgggctctgctttatcaaaagaaataggaatgatggaagctcagttgaatcgttgg
aaggagacagctcaagaagctgtttctttacgtgaagaaagacagtcactggaagcttct
ttaggaagaaaggctaatgagcacaaagacttgatcggtaaatgtgcacaccagactggg
gagatccgaacactaaaggaacttgctgagaagatgcagagggacaacctggaacgtgaa
atcttcttggacatgtttggccagcaaatttatgataacagagacatatcggaaattaga
gattcagagaaaagagctcactcgcaagctgaaattttgagagctgctttgaatgaacat
gatttggaattgagagtgaaagctgctaatgaagctgagtctgcttgtcagcagaggctt
tctgctgctgaggaagaaattgcagaactaagggcagaactggatgcttctgacaggggt
gttttagagctaacagaggcaataaaaataaaagaaggggaggctgaaacctatatatct
gagattgagacgattggtcaagcctatgaagacatgcagacacagaatcaacatcttctc
cagcaattggcggagagggatgattataatataaagttagtttctgagagcgtgaagata
aagcaggaacaaagcttacttctctcccggaagaaggtattaacagcacaacttcaacag
tctaaaacatcacttgaatctctgaaaacggggatagctcaaattgaagaccagatgaaa
gttcacattacagaagcgttaagttatacccaagaagatagacatcttgcactcctcctg
gaaactgcaaagcgagaattgggagatgctgataaggaattgaagtggttgagatctgct
gcttcctcctccgagaaggaatatgaacagctccagagaaagctgggtgaaattcagatg
gaacgggtaactgaaaggagtgagaaaaagaagcttgatgaagagctagtggagttgagt
aatactgttgatgagttaacttctgcaagtggggaggctgcagtacaaagactgcaggat
gaaatcaatgattccaaggctattctcaaatgtggagtgtgtcttgatcggccaaaagag
gtcgtaatcacaaaatgttatcatctgttctgcaatccatgcatccagagaaatttagag
atccgtcatcgcaagtgtcctgcttgtggaaccgcttttgggcaaagcgacgtccgtttt
gtaaaaatctga
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