Solanum dulcamara (climbing nightshade): 129888418
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Entry
129888418 CDS
T09577
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00520
Amino sugar and nucleotide sugar metabolism
sdul01100
Metabolic pathways
sdul01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
129888418
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
129888418
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-GeneID:
129888418
NCBI-ProteinID:
XP_055819373
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Position
5:68379894..68383192
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AA seq
654 aa
AA seq
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MSSEPAPYVPKNVLITGAAGFIPSHVTNRLTKLYPNYRIVALDKLDYCSSLKNLELSYSS
PNFKFVKADITSADLINHLLVEEKIDTIMHFAAQTHVDNSFGNSFEFTTNNIYGTHVLLE
ACKLTKSIKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYNRS
YGLPTITTRGNNVYGPNQFPEKLIPKFIILAMKGERLPIHGDGTNVRSYLYSDDVAEAFD
VILHKGVIGHVYNIGTKKERRVLDVAEDICKLFGKNAQEVIELVQDRPFNDQRYFLDDQK
LKKLGWQERTTWEAGLKMTLDWYTKNPDWWGDITGALRPHPRISNVVPSHDEGCLLQLIK
GSKNGSGSDLKFLIYGRTGWIGGLLGKICEERGIAYEYGLGRLQDRNSLMHDMIRVKPTH
VFNAAGVTGRPNVDWCESHKVETIRTNVAGTLSLADICREADIMVMNFATGCIFEYDERH
PLGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITK
ITRYDKVVNIPNSMTVLDELLPISIEMAKRNCRGIWNFTNPGVVSHNEILEMYRDYIDPK
FKWQNFDLQEQAKVIVAPRSNNELDMTKLKKEFPELLSIKDSIIKYVFGPNKKT
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgaaccagctccttatgtacccaaaaatgtcctcataacgggtgcagcaggc
ttcattccctcacatgtaaccaatagattgaccaagctttatcctaactacaggattgtt
gctcttgacaagctcgattattgttcgagtctaaaaaatttggagctaagttactcatct
ccaaatttcaaatttgtcaaggctgatattacgagtgctgatcttatcaaccatcttttg
gttgaggagaaaattgacacaattatgcattttgcagcacagactcatgttgataattca
tttggaaattcattcgagttcacaaccaataacatttatggtactcatgtgcttcttgaa
gcttgtaagttgactaaatccatcaagagattcattcatgttagtacggatgaagtttat
ggtgagactgatttggagactgacattggcaatcctgaagcttctcaactccttcctact
aatccatattccgcaactaaagctggagctgaaatgcttgtcatggcttacaataggtct
tatggcctaccgacaatcactactcgagggaataacgtgtatggcccaaatcagttccct
gagaagttgattccaaagttcattatccttgcaatgaagggtgagcgtttgccaattcat
ggtgatggaacaaatgttaggagttatttgtactccgatgatgttgctgaggcatttgat
gtgatattgcataaaggggtgattggacatgtgtataacattggcactaagaaggagagg
cgagttttggacgtggctgaggacatatgcaagttattcgggaagaacgctcaagaagtt
atcgagcttgtccaagataggccttttaatgaccaaaggtatttcctagatgatcaaaag
cttaagaagttagggtggcaagaaagaaccacttgggaggcaggactaaagatgaccctg
gattggtacaccaaaaatcctgattggtggggtgatataactggagcccttcgcccacat
cctagaatttcaaacgttgtgccttcacatgatgaagggtgtctattgcagcttataaaa
ggaagcaagaacggtagtggctcagacttgaagttcttgatttatggaagaaccggttgg
attggagggttattaggaaagatttgtgaagaacgtggaatagcatacgagtatgggtta
ggacgtctgcaagataggaattcgctaatgcatgacatgataagagtaaagccaacccat
gttttcaatgcagctggtgttactgggaggcctaatgtcgattggtgtgaatcacataaa
gtagagacaattagaactaacgttgctggtacactatctttagctgatatctgtagagaa
gcagatatcatggtgatgaatttcgcgacaggttgcatatttgagtatgatgagcgacac
cctctaggctcaggcatcggattcaaggaggaagacaaaccaaattttacaggatccttc
tactcgaagaccaaagccatggttgaagagcttctaaaagaatatgataatgtttgcacc
cttagagtaagaatgccaatatcatcagaccttaacaacccgagaaacttcataacaaag
ataacgcgttatgataaagtggtaaacatcccaaatagcatgacagtgctagatgagctg
ctaccaatctctattgaaatggcaaaaagaaactgtagagggatatggaacttcactaat
ccgggagttgtgagccacaacgagattttagagatgtacagagactacattgatcccaaa
ttcaaatggcagaatttcgatcttcaagaacaagccaaagtgattgttgccccgcgaagt
aacaatgaacttgacatgacaaagctgaaaaaagagtttccagaattgctatcgatcaaa
gattctatcatcaagtatgtcttcggaccaaacaaaaaaacataa
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