Solanum dulcamara (climbing nightshade): 129888488
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Entry
129888488 CDS
T09577
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129888488
03012 Translation factors [BR:
sdul03012
]
129888488
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129888488
mRNA cycle factors
Stress granule specific factors
129888488
Translation factors [BR:
sdul03012
]
Eukaryotic type
Initiation factors
eIF-4
129888488
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
129888488
NCBI-ProteinID:
XP_055819429
LinkDB
All DBs
Position
5:73994063..74003992
Genome browser
AA seq
1647 aa
AA seq
DB search
MQRRGDQKKSESQNHYKRNSRIGGRSPSAQPQYQRVTSGKGGGSSVLPPPSTTTQSFKKS
DGETGPLKVTDAVQNDAPARTSGSDKLVEPADRIRHEDNQIVSSALSSQHTSSDLDPSAP
KTPMKDDASKIVALQFGSFTPGFVNGMQIPQRTNSAPPNMDEQKRIQARSSPFRPQQLFP
SSTPHQPQQREDIGKPMDKNPDPQHFHERDLPVHVQVPAAQAVSSMQKFSLSFPGVPVNP
PFLQPHGPVQFGMPGPQVQHQGIPRSSFPMPMPLPVGNPNQVRHPPFVPGLQPHPMQLQG
AMQHGQMMNFPPKFGHQLSPPFGNMGFGIPPQFGQHVRKVNSRKSVKITHPDTHEELKLD
EKVDMKLDGGSSGLAIHHPGALPSQPMHYGSSRPMSFFPQMSSNPMFLQNTPSIPITNSL
VASCPPRLGYNSSAPVQLAINQAPVSVRREVLASSYPVSKKIAETEKALQPPFRVNSNEE
ESRILSETSVEVSESASKPTPFASPSSKSLVSVDIPPSGSASSIESNVNHVRGVDYVETE
LKNPPKKSQLNPQQLREEGNSASISNPTPTNSVDRISEGQNAESIETQATSTLSEIPSDV
SICSGASVRNPSERPYSSMAAKKTQTEGNSNDRNASDLVSSTGGCETNNVVHQLSHSAAS
LSDCNVSKIVAPVAMNNNKEVWPSASGAKHNEDSHIHTSPSSPSYTKSRGKVSEETKTEY
RRVQGSSPKDKPTNKVKSANSRGKKKRREILQKADAAGDTSDLYMAFKGPKEKLQSWIYS
GSVESCSSLTARKISSSSNEDFSANEDKKSTGEPNNWEDAAMSTPKLETSGDNKIVNDNL
RHPNGGSDTTGQKRYSRDFLLTLSSHFGDLPSNFEVPWHMVEALLSPNSSISKGVDFNKN
GPNPCPGQINSRQGCSSWSENRPTGMADDGRWTNEQHIDINQGGSVNGARPGRGNHKNMR
NLQGQPPSQYVSVLPAGTMLPLASQGGIQHIRSDANRWQRVSGSRKGSFPSHSPLQVMHK
ADKKYEIRKVTDAEEAKRRHLKAILNKLTPQNFEKLFEQVKEVNIDSATTLAGVISQIFD
KALMEPTFCEMYANFCYHLAGELPDFVEDNQKITFKRLLLDKCQEEFERGEREEAEADSM
EDDGVVKLSEGKREEMRLQTRRRMLGNIRLIGELYKKKMLTERIMHECIQKLLGQYQTPD
EEDIESLCNLMSTIGEMIDHSKAKDYMDAYFDMMTTMANNTDLSTRVRFMLMDIIDLRKN
KWQQRRKVEGPKKIEEVRRDAVHERRAQVGRSTRGSSTVSSARRGQPADLSPRPSMFSSP
APKMTPFRGIPSQNRGFGSQDCRLEAKHRHESRTSSAAMPQRSIDDNKTMSPQGVPGRGT
PFRGPAMHSGGPVTAGAGGWSPYNSRQESISRYAPGTVMKTTANYARPNQHEHAHYAERE
VTNTNRHFGRSAEPPAPNSPGTIWSEERLGEMSIAAIREFYSAVDEDEVVLRIGELNSPS
FHPIMLSIWVNDSFQRKERDRDLLARLLISLTKSKVVLETKHLIEGFESVLATLEDEVTD
APKAAVFLGHIFGRLISENVISLKETGHLIRHGGEESGHLLQTGLGYELLESTFDLIRSE
KGESALRDICSASSTQLEDFRPPVLSK
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcaggggtgatcagaagaaaagtgaatcacagaatcactacaagagaaatagt
cgaattggtggtcgttcaccatcagcacagcctcagtatcaacgggttacttctggaaaa
ggcggtggtagctctgttctacctcctccttctaccaccacgcaaagcttcaagaagtct
gatggagaaacaggtccactgaaagtgactgatgctgtgcaaaatgatgcccctgccaga
acctcaggatcagataagttagttgagccagcagatagaatcagacatgaagataaccaa
attgtttctagtgctctttcttctcaacatacatcttcagatttggatccgtcagctccc
aagacccccatgaaagatgacgcttctaaaattgtagctcttcaatttggaagttttacc
ccaggttttgtgaatggaatgcagattccgcaaagaaccaactcagcaccccccaacatg
gatgagcagaagcgtattcaggcacgatctagtccttttagaccacagcagctttttcct
tcttctactccacatcagccgcagcagagggaggacatcgggaagccgatggataaaaat
cctgatcctcagcattttcatgaaagagatctacctgttcatgttcaggttccagcagct
caggctgtcagtagcatgcagaagttttctctctcatttccgggagttccagtcaatcct
ccttttctgcagcctcatggtcctgtgcagttcggaatgcctggaccacaggttcaacat
caaggaatacctagatcttcattcccaatgccaatgccactaccagttggaaatcccaac
caagttaggcatcccccatttgtccctggtctccaacctcaccctatgcagcttcaggga
gcaatgcaacacggacaaatgatgaacttccctcctaaatttggtcatcagctgagccct
ccatttggcaacatgggatttgggattccacctcagtttgggcagcatgttaggaaggtt
aattctcgcaaatctgttaaaattactcatcccgacactcatgaagagttgaagctagat
gagaaggttgacatgaaattggatggtggttcatctggcttggcaatacatcatcctgga
gctttaccatcacagcctatgcattatggttcctctcgtcctatgagctttttcccacag
atgtcctcgaatcctatgttcttacaaaacactccttcaattcctataacaaactccctt
gtggcgtcctgccctcccagactaggatataactcttcagctccagttcaattggcaatt
aaccaagctcctgtctctgtcagaagagaggttttggcatcttcatatccagtttccaag
aagatagcggagacagaaaaggcattgcaaccaccttttagagttaactctaatgaagag
gaatcaaggattctctcagaaacctctgttgaggtttcagaatctgcctccaagccaaca
ccttttgcttcaccctcaagcaaatcacttgtttctgtcgatatacctccttctggtagt
gcttcatctatagaaagcaatgttaaccatgttcgaggagttgattatgttgagaccgag
ttgaagaaccctcccaagaaaagccaattaaatcctcagcaactacgagaggaaggaaat
tctgcgtccatatcgaaccctactccaacaaattcagtagaccgtatttctgaaggtcaa
aatgctgaaagtatagaaacccaagcaacttccacattatcagagatacctagtgatgtt
tccatttgttctggagcatctgtgcgtaatccatctgaacggccttatagctccatggca
gcaaaaaaaactcaaactgaaggaaactcaaatgataggaatgcatcggatctagtatca
agcacaggtggatgtgaaactaacaatgtggttcatcagttgtcacattctgctgcttcc
ttatcagattgcaatgtttccaaaattgtggcgcctgttgctatgaataataataaagaa
gtttggccttctgcgtctggagcaaagcataatgaggattctcatattcatacttcaccg
tcatctccatcatataccaaaagtaggggaaaagtctctgaggaaacaaaaactgaatat
cgtcgcgttcaaggatcaagtccaaaggataaacctacaaataaggtgaaaagtgctaac
tctaggggaaagaaaaagagaagagaaattcttcagaaagctgatgcagctggggatacg
tctgatctttatatggcattcaagggacccaaggagaaactacagtcttggatttattca
ggaagtgttgagagttgttccagtctcactgcaaggaagatatcatcaagttccaatgaa
gatttttcggcaaatgaggataaaaagagtacaggtgaaccaaacaactgggaagatgct
gctatgtcaactccaaaattggaaacttctggtgacaataaaattgttaatgataatctt
aggcatccaaatggtggaagtgatactacaggacaaaagagatactcaagagatttcctt
cttaccctttcttctcatttcggtgatctcccttctaattttgaagttccgtggcatatg
gtggaggcccttttgagtcctaactccagcatttcgaaaggggtggattttaacaagaat
ggtccaaacccctgtcctggacaaattaatagcagacaaggctgctcttcttggtctgag
aaccgtcctactggaatggcagatgatggcaggtggaccaatgagcaacatattgatatc
aaccaagggggaagcgttaatggtgctcgtccgggtcgaggaaaccacaagaatatgagg
aatttacaaggacaaccacctagccaatatgtatctgtgttacctgctggaacaatgctg
ccattagcctctcagggaggaatacaacatattcggtccgatgccaaccgctggcagcgg
gtttctggctcccgaaaaggttcatttccttctcactctccactgcaagttatgcacaaa
gctgacaagaaatatgagatacgcaaagtgactgatgcggaagaggcaaaacgtagacac
ttgaaagctatcctcaacaagctaacgccacaaaattttgagaagctgtttgagcaagta
aaggaggttaatattgatagtgctaccactcttgctggtgtcatttcacagatatttgac
aaagctctaatggagccaacattttgtgagatgtatgcaaatttttgttatcatctagcc
ggggagcttcctgattttgtggaggacaatcagaaaataaccttcaagagacttctcctt
gataaatgccaagaggagtttgagagaggtgaaagagaagaagcagaagccgacagtatg
gaagatgatggagtggtgaagctgtcagagggaaagagagaggagatgagattacaaaca
cgaagaaggatgttaggtaacataagattgattggggaattatacaagaaaaagatgctt
acagagaggataatgcatgagtgcatccagaaattgctcgggcagtaccagactccagat
gaggaagatattgagtctctctgcaatcttatgagcactataggagaaatgatcgaccat
tccaaggcgaaggattacatggacgcctattttgatatgatgacgacaatggctaacaat
acagatttgtctactagggtgaggtttatgttgatggatattattgatttgagaaaaaat
aagtggcagcaaagaagaaaagtagaaggccccaaaaaaatagaggaagtgagaagagat
gctgttcatgaacgtcgagctcaggttggtcggtccactcgtggttcaagcactgtttct
tctgctagaagagggcagcctgcagatttaagtcctcggccatccatgttttcttctcca
gctcctaagatgactccatttcgtggaataccatcacaaaatcgtggatttggaagccag
gattgcaggttagaagctaaacatcgacatgagagtaggacatcatcagctgccatgcca
cagcgatctattgatgataataaaacgatgagtccgcagggagtccccggaaggggaact
cctttcaggggcccagcaatgcattctggtggtcccgtgactgctggggcaggtggctgg
tcaccatataactcaagacaagaatcaatatccagatatgctccagggacagttatgaag
actactgctaattatgctcgaccaaatcaacatgagcacgcacattatgcagaaagagaa
gtaacaaatacaaatcgtcattttgggagatctgccgaaccaccagcaccaaattcacca
ggaacgatatggtctgaagaacgtcttggagaaatgtcaattgcagctattcgcgaattt
tacagtgcagttgatgaggacgaagttgttctacgcattggagaattgaactcaccgagt
tttcatccaataatgttatcgatatgggtaaatgactcatttcagaggaaagaaagggac
agggatcttcttgctcggcttcttatcagtcttacgaagtccaaggtggtactggaaacc
aaacatctcattgaggggtttgaatcagttttagctacattggaggatgaagttactgat
gctcccaaagcagctgtatttcttggtcacattttcggtagattaattagcgaaaatgtg
atctctctgaaagaaacaggacatcttataagacatggcggtgaagagtctggtcatctt
ctgcaaactggattgggatatgaacttctcgaaagtacatttgaccttatacgatcagag
aagggagaatcagccttgagagatatctgcagcgcgtctagcacacagttggaagatttt
agaccacccgtgctgtccaaatga
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integrated database retrieval system
