Entry |
|
Name |
(RefSeq) RNA-binding NOB1-like protein
|
KO |
K11883 | RNA-binding protein NOB1 |
|
Organism |
sdul Solanum dulcamara (climbing nightshade)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:sdul00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129888684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:sdul03009]
129888684
03051 Proteasome [BR:sdul03051]
129888684
Ribosome biogenesis [BR:sdul03009]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
129888684
Proteasome [BR:sdul03051]
Eukaryotic proteasome
Assembling factors
Other assembling factors
129888684
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5:1506005..1510308
|
AA seq |
647 aa
MSSTAMDTQLPSPQPPCWSNIVKQQPPPQPSPQSTITPATVTAAAAAATAAAGNGVLVGN
CKSTKGIAVAVVDANAIIQGGDKLNHSADRFVSVPEVLSEIRDPNSRHSLNFLPFTVDTT
EPSPDSLKKVISFARATGDLHTLSDVDLKLIALTYTLEAQFHGTQHLRDCPPPIHMVNVK
RLPEKELPGWGTNVPNPEEWEAIEHALDNGANTNSRILPLKDLSLNVVPLDQQSGRDDSV
VNGGDSHSENQMNADDGFSKPQKYLAQKKEVKIEGKKMVADGIDASQGQYDDHGDDWLPA
VSRSTHRRFLRRKARREMSETSSKMDDLQDATENTVDENLDNCQCGDISMRHNPEENPKK
NAEDGKVSEVKDGEENLFTILSQMRLEEDSEQALQDDADVNISIEGPESNDTKQDGKEFE
EDEGENFDCADGGVEDAEMASQMDESIETSFVDDNSSEQSWMLKSLSESSVACVTADYAM
QNVILQMGLRLVAPGGMQIRELHRWVLKCHACYKVTTDVTRIFCPNCGNGGTLRKVAVTV
GENGIVIAARRPRISLRGTKFSLPLPQGGRDAVTKNPILREDQLPQKYLYPKTKKKNKEG
DDIFTPDTIFLNHTSKKAPLQPPVRKALAVFSGKRNPNDNHYSRAKH |
NT seq |
1944 nt +upstreamnt +downstreamnt
atgagctccacagccatggatacccagctcccttctccacaaccaccatgttggagcaac
atagtgaagcaacaaccgccgccacaaccatcgccgcaatctactattactccggccacc
gtcactgccgccgcagctgcagcaacggcggcggcaggtaacggagttttggtagggaat
tgcaagtcgacgaaggggatagcagtggctgtggtagatgctaatgctataattcaaggc
ggagataagctgaatcattctgctgaccggtttgtttcggtacctgaagtgctttcagag
attcgtgacccgaattcacgtcattcactcaatttccttccgttcactgttgataccaca
gagccgtctcccgattctcttaagaaagttatcagctttgcaagggctacaggtgatttg
cacacactttctgatgtggatctcaagctcattgccttaacttataccttggaggctcaa
tttcatggaactcaacatctccgagattgcccgccacctattcacatggttaatgtgaaa
aggttgccagagaaggagttgcctggatgggggacgaacgtccctaatccggaggaatgg
gaagcaatagaacatgcacttgataatggagcaaacaccaactctagaattcttcccttg
aaagatttgagtttgaatgttgttcctcttgatcaacaaagtggtagagatgattctgtc
gtgaatggtggtgattctcattctgagaatcagatgaatgctgatgatggcttcagtaaa
cctcaaaagtacttggcacagaaaaaagaggtgaagattgaaggtaagaagatggttgcc
gatggaattgatgcatcacaaggacaatatgatgatcatggtgatgattggctacccgct
gtgagcagaagtactcatagaagatttctcagacgaaaagctagacgtgaaatgtctgag
acatcatctaaaatggatgatttacaagatgcaactgaaaatacagtagatgaaaatctc
gacaactgtcaatgcggcgatatctctatgcgtcataaccctgaagaaaatcccaagaag
aatgccgaggatggtaaggtttctgaagtaaaagatggtgaggaaaatttgtttacgatt
ttgagtcagatgcggcttgaagaagattctgaacaagctcttcaagatgatgcagatgta
aacatttccattgaggggcctgaatcaaatgatactaagcaagatggaaaagaatttgaa
gaagatgaaggggagaatttcgactgtgctgatggaggagtggaagatgcagagatggcc
agccagatggatgagagcattgagacatcatttgtggatgataacagcagtgaacaaagt
tggatgttaaaatccttgtccgagtcaagcgtggcctgtgtgacagctgattatgcaatg
caaaatgttattcttcaaatgggtttacgccttgtggcacctggaggaatgcagatccgt
gaactgcacaggtgggtactgaaatgccatgcctgctataaagtgacaacagatgttact
aggattttctgtcccaattgtggaaatggaggcactttacgcaaggtagcagtgactgtt
ggtgaaaatggcattgtgattgcagcacgcagaccacgtatatccttgcgagggacaaag
ttctccctgcctttacctcaagggggtagagatgctgttaccaagaacccaatattacgt
gaggaccagctgccacagaagtatctttatcctaaaacaaagaagaagaacaaggagggg
gacgacatatttactccggacactatttttctcaaccatactagtaagaaggctcctctg
cagccccctgttcgcaaggcactagctgttttcagcgggaagaggaatcctaatgacaat
cattattctcgcgctaagcattag |