Solanum dulcamara (climbing nightshade): 129888738
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Entry
129888738 CDS
T09577
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129888738
Spliceosome [BR:
sdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129888738
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
PIP49_N
Motif
Other DBs
NCBI-GeneID:
129888738
NCBI-ProteinID:
XP_055819700
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All DBs
Position
5:2308407..2313069
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AA seq
365 aa
AA seq
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MATVNPFDLLDDDAEDPSLLIAAQQLKPAAPIASAPTKKGPVQAQAKPAAKLPSKPVPPS
QAGREARTDGQRGGGRGGPRGGGRGRGRGFNQEFADDENAFGSNNGFSGRYSAPEDGESG
KVSERRGGYGGYRGGFRGGRRGGFNNGDPAEGEGERPRRVYDRRSGTGRGNEFIKREGAG
RGNWGTTADDIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAEPEEKEPEEKEMT
LEEYEKVMEEKRKALLALKQEERKVNLDKELESMQLLSNKKNDDEIFIKLGAEKDKKKEA
VEKNKKTKSINEFLKPAEGESYYRPGGRGRGRDRGRGNGGGYGGINSVSAPSIEDVGQFP
SLAAK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtgaacccatttgaccttttggatgatgatgctgaggacccaagtttgcta
attgctgctcagcagctaaagccggcggctcctattgcatctgcaccaaccaagaagggt
ccagttcaggctcaagctaagcctgctgctaagttgccctccaagccggttcctccttct
caggctgggagggaagcgaggactgatggccagcgaggaggaggccgcggaggtccacgt
ggaggtggtcgtgggcgtggacgcgggtttaaccaagaatttgctgatgacgagaatgct
tttggcagcaataatggattctctgggcggtacagtgctccagaagatggagaatctgga
aaggtctctgaaaggagaggtggatacggtggatatcgtggggggttccgtggaggtcgt
cgtggtggtttcaataacggggatcctgcagaaggagaaggggaacgcccaaggagagtg
tatgatcgacgaagtggaactggccgtgggaatgagtttattaaacgggagggcgctggt
cgtgggaattggggaactactgcagatgatattgcaccggagactgaagaacccgttaat
gatggtgagaagattgttgaggctgagaaacaagccggacaggaagatgctggggacacc
aataaggattctactgctgctgagccagaagagaaggaacccgaggagaaggagatgacc
ctcgaggagtatgagaaggtaatggaagagaagaggaaggctttgctggctctgaagcaa
gaggaaagaaaggttaatttggacaaagaacttgaatctatgcaacttctctcaaacaag
aagaatgatgatgagatcttcatcaaattgggtgctgagaaagataagaaaaaggaagca
gtggaaaaaaacaaaaagacaaaaagcataaacgaatttctgaagcctgctgagggagaa
agttactatcgccctggtggccgtggtaggggcagggaccgtggaagaggtaatggcggt
ggatatggtggaatcaacagtgtttcagccccatccattgaagatgttggtcaattcccc
tccttggctgccaagtaa
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