Solanum dulcamara (climbing nightshade): 129888768
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Entry
129888768 CDS
T09577
Name
(RefSeq) transcription factor MYC1-like
KO
K13422
transcription factor MYC2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04016
MAPK signaling pathway - plant
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
129888768
04075 Plant hormone signal transduction
129888768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129888768
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
129888768
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
Bap31_Bap29_C
bHLH_INO4
DUF2397
Motif
Other DBs
NCBI-GeneID:
129888768
NCBI-ProteinID:
XP_055819747
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Position
5:complement(2776252..2778484)
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AA seq
648 aa
AA seq
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MSDYRLWSNSNTTNTSDDNMMDAFLSSDPPSFWPGTASSTPNRTSISPVPMNGGGGTDPL
KTMPFFNQESLQQRLQALIDGARESWAYAIFWQSSSSVVDFASTSVLGWGDGYYKGEEDK
NKRRASSSSPNFLAEQEHRKKVLRELNSLISGVQNAGGGGADDAVDEEVTDTEWFFLISM
TQSFVNGNGLPGLAMYSSSPIWVTGIEKLAASQCERARQAQGFGLQTIVCIPSVNGVVEL
GSTELIFQSSDFMNKVKFLFNFNIDMGSASVHSEPDPSALWLTDPSSSIVEAKDSLITVP
SSNVSKQLVFGNENCENGAQNHQHSQQTRGFFTKELNFSGYGFDGSSTRNKNGNSSISCK
PESGEILNFGDSSKRSGSLFSGQSQFGVGPGLAEENKNKNKKRSPVSRGNNEEGILSFVS
GVILPTSTTGKSGGGGDSDHSDLEASVVKEAVVEPEKKPRKRGRKPANGREEPLNHVEAE
RQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVQYSDSDKEELRSQIES
LRKELANKGSSNYPVPPPSNQDLKIVDMDIDIKVIGWDAMIRIQCGKKNHPAARLMAALK
DLDLDVHHASVSVVNDLMIQQATVKMGSRLYAQEQLRIALTSKIVESP
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattatagattatggagtaatagtaatactactaatacatctgatgataacatg
atggatgcttttttatcttcagatccaccatctttttggcctggaactgcttcttcaact
cccaatcgaacttccatttctccggttccgatgaacggaggaggaggaacagacccatta
aaaacgatgccgtttttcaatcaagaatcactacaacaaaggcttcaagctttaatcgac
ggtgctcgtgaatcatgggcgtatgctattttctggcaatcatcttcgtctgttgttgat
tttgcgagcacgtcggtgttgggttggggagatgggtattataaaggtgaagaagataag
aacaaacggagagcatcatcgtcttctcctaattttttagctgaacaagagcatcggaag
aaggttctccgggaactgaattccttaatttccggcgtacagaacgccggcggcggcgga
gcagatgatgctgtagatgaagaagttacagatactgaatggttttttcttatttcaatg
acccaatcgtttgttaacggaaacgggcttccgggcttggcgatgtacagttcaagcccg
atttgggttactggaatagaaaaattagctgcttcccaatgtgaacgggccagacaagct
caaggattcgggcttcagacgattgtttgtattccttcagttaatggtgttgtcgagctt
ggttcaactgagcttatatttcagagctcggatttcatgaacaaggttaaatttttgttc
aacttcaatattgatatgggttcggcttctgtgcattccgagcccgatccgtcagccctt
tggctgacggatccatcttcctcaattgtggaagctaaggattctttaattacagttcct
tcaagtaatgttagtaaacaacttgtgtttgggaatgagaattgtgaaaatggtgctcaa
aatcatcagcattctcaacaaacacgaggatttttcactaaggagttgaatttttcgggt
tatggatttgatggaagtagtactaggaataaaaatggaaattcttcgatttcttgtaag
ccggagtcgggggagatactgaattttggtgatagtagtaagagaagtgggagcttgttt
tcaggccaatcccagttcggggttgggcccgggctcgcggaggagaacaagaacaagaac
aagaaaagatcacctgtatcaaggggaaacaatgaagaaggaattctttcgtttgtttcg
ggtgtgatcttgccaacttcaacaacggggaagtccggtggaggtggggattcggatcac
tcagatctcgaggcctcagtggtgaaggaggccgttgtagaacctgaaaagaagccgagg
aagcgaggtaggaaaccagctaatggaagggaggaacccttgaatcacgtggaggcggag
aggcagagaagggagaaattgaatcaaagattctacgctctcagagccgtagtcccaaat
gtgtcgaaaatggataaggcatcactacttggagatgcaattgcatacatcaatgagttg
aaatcaaaggttcaatattcagattcagataaagaagagttgaggagccaaattgaatct
ttaaggaaagaattagccaacaagggttcatcaaactatcccgtcccccctccatcgaat
caagatctcaagattgtcgatatggacatagacattaaggtgattggatgggatgctatg
attcgtatacaatgtggtaaaaagaaccatccagccgcgaggctaatggcagccctcaag
gacttggacctagacgtgcaccacgctagtgtttccgttgtgaatgatttgatgatccaa
caagcgacagtgaaaatgggaagccggctttacgcgcaagagcagcttaggatagcattg
acatcgaaaattgttgaatcgccatga
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