Solanum dulcamara (climbing nightshade): 129888801
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Entry
129888801 CDS
T09577
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00270
Cysteine and methionine metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
129888801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129888801
03032 DNA replication proteins [BR:
sdul03032
]
129888801
03036 Chromosome and associated proteins [BR:
sdul03036
]
129888801
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sdul02048
]
129888801
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
129888801
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129888801
DNA replication proteins [BR:
sdul03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
129888801
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129888801
Prokaryotic defense system [BR:
sdul02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
129888801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
129888801
NCBI-ProteinID:
XP_055819789
LinkDB
All DBs
Position
5:3289575..3310810
Genome browser
AA seq
1098 aa
AA seq
DB search
MATEFNNSSRFSTNLTPSPQKTKPISSPSSNPDALALSFPQNEEPVPLIVCYPLKRRSSR
FTTNKFSTSAITATEFMKKKNRKCISPENELFLLPSPALAGKKNPAEGTRRSPRLSSLSA
KTTTTTEEEVEGKGKNVISRKSKGIDQVELSRKRKNELIGSKMDEKTRKKSPRFDSDSNG
AKLEQLALPEDSACTALPEESVWDTRAAGGRTGTKRELLALLMPEGKNSKRATRGSYSVN
VRQDSRGYRRKDLFFPTSPGTSEKMSAAGSNSVGEKSLRSRKIQGIVNYESVSKGSEMKR
KNSSDSSEKSERKQKSNACFIGEPIDTEEAQEKWRWRYELKNRKTQRQGWKLNSGEEDEI
ILNVECHYAQAKVAGFIFNIGDCAYVKGEGKKKHIGRILEFFKTTEGEDYFRVQWFFRAE
DTVLKGAASFHDPKRIFYSTLENDNLLDCIVSKVNVVELPTRRDLNKKDVPPAHFYYDME
YCVDYSTFRTLHNVKSSVSPSLVDASYKPITTYPLEVSPSCEPMKVELSLLDLYAGCGGM
SMGLCLGTKLSGLNLVTKWAVDFNRSACDSLKLNHPQTHVRNEGVEDFLELLKRWEKLIE
SYGCSDIKTSSNGELDDRDEGENNDDSQAGSNASSGEYEVLRLVDICYGDPNNEGKSGLH
FKVRWKGYSPNEDTWEPIENLENCGDSIKDFVRRGQQLKILPLPGDVDMICGGPPCQGIS
GYNRHRNVDDPLSDEKNRQIIIFMDVVEFLRPKYVLMENVADILRFDKASLGRYALSRLV
HMRYQARLGTMAAGCYGLPQFRLRVFFWGALPSERLPPFPLPSHDVIVKYWPSPEFERNT
VAYEEGQPRDLEEALVLRDAISDMPAVTWHETREEMPYEMPPETEFQKYIRLSKHEIMSC
SSTGVKETKEPILSDHRPCQLNEDDYLRVCLVPHRKGANFRDLPGVIVGGDNVARRDTKD
PKVLPNGKPMVPECAFNFEQGKSKRPFGRLWWDETVATLVTFPNHRAQAILHPEQDRVLT
IREYARLQGFPDFYRFTGTLKERYCQVGNAVAVPVGRALGYALGLAYQRLAGNEPLIKLP
PNFSFLTPPIDDIVVLQN
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagagttcaacaattcttcaagattctctacaaatttaactccgtcacctcaa
aaaaccaaacccatttcatctccatcatcaaatccagatgcattagctctgtctttccct
caaaacgaagagccagttccattgatagtctgttacccattaaaaaggagatcttctaga
ttcactaccaacaagttcagtactagtgctattactgctacagaattcatgaagaaaaaa
aatcggaagtgcatttctcctgaaaatgaactttttcttcttccttctcctgcattggcc
ggaaaaaaaaatccggcggaaggtacgaggaggtcgccgagattgtcgtcactgtcagct
aagacgacgacgacgacggaggaagaggttgagggtaaggggaaaaatgtaatttcgagg
aaatcaaagggtatagatcaagtggaattatcgaggaaacggaagaatgaattgattggt
tcaaaaatggatgaaaaaactcgaaaaaaatctccgaggttcgattccgattctaatgga
gctaaattagaacaattggcattgccggaggatagcgcgtgtaccgcattgccggaggag
agcgtgtgggatacacgcgccgccggtggaagaacgggtacgaagagggaattgctggct
ttgcttatgccggagggtaagaacagcaaacgagctaccaggggaagttattcagtaaat
gtaaggcaagattcccgaggatatcggaggaaagatttattttttcctacatcgccggga
acatcggagaaaatgtcggcggctgggagtaattcggtgggagaaaagagtttaagatca
agaaaaatacaagggattgttaattatgagagtgttagtaaagggtcagaaatgaaaagg
aagaattcatcagattcatcagagaaaagtgaaaggaaacagaagagtaatgcatgtttt
attggggagccaattgatacagaggaagctcaagagaaatggcgatggcggtacgagttg
aagaatcggaaaacgcagcgtcaaggctggaaattaaattctggtgaagaagatgaaatc
atattaaatgtggaatgccattatgctcaagctaaggttgctggtttcattttcaatatt
ggagattgtgcatatgtaaagggtgaaggcaagaaaaaacatatcggcaggatcttggag
tttttcaagacaacagagggggaagattattttagggtacaatggttcttcagagctgaa
gatacggtgttgaaaggtgctgcttctttccatgacccaaagcgcatattttattctact
ttagagaatgataatttgctagactgcatagtttccaaagtcaatgtggtagaattacca
accaggcgtgatttaaataaaaaggatgttccacctgctcacttttattacgacatggaa
tactgtgttgattattccacattccgtacgttgcacaatgtcaaaagttccgtttcccct
tcgctagttgatgcgtcatataagcctatcacgacatatcctctggaggtatcaccaagt
tgtgaacctatgaaagtggagttgtcattattggatctatacgctggttgtggcggcatg
tcaatgggattgtgccttggtaccaaactctctggtcttaatcttgtgacgaaatgggca
gttgattttaatagatctgcctgtgatagcctgaaactgaatcatcctcagacacatgtt
aggaatgaaggtgttgaggattttctggagctactgaaaagatgggagaagctaattgag
tcgtacggctgtagtgatatcaaaactagctcaaatggtgagctagacgatagagatgaa
ggtgaaaacaatgatgattcccaggctggttccaatgcatcttctggagaatatgaggta
ttaagattagttgacatatgttacggggatcccaacaacgaaggaaaatctggacttcat
tttaaggtgcgatggaaaggttatagtccaaatgaagatacttgggagccaattgagaac
ttagaaaattgcggagacagcataaaagattttgttcgaagggggcaacaattgaaaatt
ctgcctctacctggtgatgttgatatgatatgtgggggtcctccttgccagggcatcagt
ggatataatcgccacagaaatgttgatgacccattatctgatgagaaaaatcgtcaaatt
attatctttatggatgttgtggaattcctacggcctaaatatgtgttgatggaaaatgtt
gctgacatattgaggtttgataaagcatctcttggaagatatgctttaagtcgtttggta
catatgagataccaagcaagacttggaactatggcagctggttgttatggtctcccccaa
tttcgattgcgagttttcttttggggtgcacttccaagtgagaggttgcccccatttcca
cttccttcgcatgacgtgattgtcaaatattggccctcacctgaatttgagcggaatact
gttgcttatgaggaaggacaaccacgtgaccttgaggaagctcttgttcttcgtgatgct
atatctgatatgccagctgtgacatggcatgaaactcgtgaagaaatgccatatgagatg
ccccccgaaaccgagtttcagaaatacataagattatctaaacatgagataatgagttgt
tcatcaactggagttaaggaaacaaaagaacctattttgtctgatcatcggccttgccaa
ctaaacgaggacgattacttgcgagtttgtctagtcccacatagaaagggagcaaatttc
agggacctccccggtgtaattgtcggaggggataatgtggctcgtcgtgatactaaagat
ccaaaggtcctaccaaatggaaagcccatggttcctgagtgtgccttcaactttgagcaa
ggaaagtctaagaggccatttgggagattgtggtgggatgaaacagtagcaacattagtg
acatttcctaatcatcgtgcccaggctatcttacacccagagcaagatcgagttctgacc
atacgagagtatgcaagattgcaaggttttccagatttctataggtttactggtactctc
aaggaaagatattgccaagttgggaatgctgtagcagttcctgttgggcgagcgcttggg
tacgctcttggacttgcctatcagaggctagctggaaatgagcctcttattaaattgcca
ccaaatttctcattcttaacgcctccaattgatgacattgttgtcttgcaaaattga
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