Solanum dulcamara (climbing nightshade): 129889000
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Entry
129889000 CDS
T09577
Name
(RefSeq) la-related protein 6B
KO
K15191
La-related protein 7
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129889000
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
129889000
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Ortholog
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GFIT
Motif
Pfam:
La
RRM_1
HENMT1_C
PAM2
Hen1_LCD
Motif
Other DBs
NCBI-GeneID:
129889000
NCBI-ProteinID:
XP_055820072
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All DBs
Position
5:9462098..9467066
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AA seq
468 aa
AA seq
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MAMEESVIAVDLLPDSSPSDHTDSSSSSPFDLTSSTRLNALAPAFVPRSSSTSSLSSSSP
SISPSPSLTDLNQAGFHPVRNHFVYAPQLPVQYPSPFYGGGAQEVVASAADLDHASVSKH
GGLTDEATQKIVNQVEFYFSDLNLATTDHLIKHMLKDQEGYVPISVVALFKKIKALVRSH
AQLAQVLRISTKLVVSEDGMKVKRKIPLTETDLEELQSRIVIAENLPEDHCHQNLMKIFS
AVGSVKMIRTCLPQSSNGGASSGSRTTKSDSMLHSNKLHTFVEYETVELAERAVVELNDD
NWRNALKVRSLLRSTEKSGQAQGKKAGHESEHNFKGDDGFTLEVNEKLNEESRHHIDAKS
NELAEEHGSDGQKRDHVRGRGRGKGQGRRRGRPQFHQNNRGVHLGAPISNLNRGSNVGNA
PSNINRVGLGQHNFEQSAAAKQSSVPRMPDGTKGFSMGRGKSMAIITT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaagaatcggtaattgccgttgatttactcccggattcttcaccgtctgat
cacaccgactcttcttcttcttcaccgtttgatctgacttcttccaccagactaaacgcg
ttggcgccggcattcgttccacggagctcatcgacttcgtctttgtcatcgtcgtcgccg
tcgatttctccttcaccgtcactgactgatttgaatcaggctggttttcatccggttcgg
aaccattttgtatatgctcctcagttaccggttcaatatccatcaccgttttatggaggt
ggtgcacaagaggttgttgctagtgcagctgatttagatcatgctagtgttagtaaacat
ggagggttaactgatgaagctactcaaaagattgttaatcaagtcgagttctatttcagt
gatttaaatttggcaacaactgatcatttaatcaaacatatgctcaaggatcaggaagga
tatgtaccaatatctgtggttgcgttgttcaagaagattaaagctcttgtacgtagtcat
gcacagcttgctcaagttctgcggatctctacaaagcttgtagttagtgaagatggaatg
aaggttaaacgcaaaattcctttgaccgaaaccgacttggaagagttgcaatctcgaata
gtgattgctgaaaatttgcccgaggatcactgccatcagaatctcatgaagattttctca
gcagttggaagcgttaaaatgatacgcacttgcttacctcagtcttccaatggtggggca
tcttcaggatctagaacaacaaagtcagacagtatgcttcacagcaacaagttacacaca
tttgtggaatacgaaaccgtcgaattggccgagagggcggttgtagaattaaatgatgac
aactggagaaatgctctgaaagtccggtcacttcttagaagcacagaaaaatctggtcaa
gctcaagggaaaaaagctggtcatgaaagtgaacacaatttcaagggggatgatggtttt
acattagaggtcaacgagaagcttaatgaagagtcacgccaccatattgatgctaaatcc
aatgagcttgcagaggagcatggcagtgatgggcagaagcgtgatcatgttcgtggtcgt
ggtcggggtaagggacagggtcggagacgtggacgtccccagttccatcaaaataatcgt
ggagttcacttaggagctcctatatcaaacttaaatcgtggaagcaatgtgggaaatgcc
ccctcaaatatcaatcgtgttggtctagggcagcataattttgagcagtcagcagcagcc
aagcaatcttctgtacctcgtatgccggatggcactaagggattctccatgggtcgaggc
aaatcaatggctattataaccacatga
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