KEGG   Solanum dulcamara (climbing nightshade): 129889117
Entry
129889117         CDS       T09577                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    129889117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129889117
Membrane trafficking [BR:sdul04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    129889117
   mTORC2 complex
    129889117
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_IFT140_1st NBCH_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_Aladin Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_IFT140_2nd Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 129889117
NCBI-ProteinID: XP_055820254
LinkDB
Position
5:complement(30826276..30838086)
AA seq 323 aa
MGLREGIEMSQPSVVLATASYDHTIKFWEAKSARCYRTIQYPESQVNRLEITPDKRFLAA
AGNPHIRLFDINSNSPQPLRSFDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGC
QREYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTIMW
DGSLIVAANNRGTCYVWRLLRGTETMTNFEPLHKLQAHDGYILKCLLSPELCEPHRYLAT
ASSDHTVKIWNVDGFTLEKTLIGHERWVWDCVFSVDGAFLITASSDTTARLWSTSTGKDI
KVYQGHHKATVCCALHDGPEPSS
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggattgagagagggaatagagatgagtcaaccatcggtggtgctagcaacggctagc
tatgatcacactataaagttttgggaggccaagagtgcccgctgctatcgaactatccaa
tacccagaatcacaagttaatcgtcttgaaattactccggataaacgcttcctggctgct
gctggaaatcctcacattcgattattcgacatcaactctaacagtcctcagccgctgagg
agctttgattcacacactaataatgtgatggcagtaggatttcaatgtgatggaaactgg
atgtattctggatctgaagatggcactgtaaagatttgggatttgagggcaccaggttgt
cagagggaatatgaaagtcgggcagctgtgaacactgtagttttgcaccctaatcagact
gagttgatatctggagaccaaaatggcaatatacgtgtgtgggatttgagagcaaattca
tgtagctgtgagttggtaccggaggtggatacagctgttcggtctttgactataatgtgg
gatggaagcttaattgttgctgccaacaatcgtggaacgtgttatgtttggcgtttacta
cgtggcactgagacaatgaccaactttgagcctctgcataagttacaggctcatgatggt
tatatcctcaaatgtcttctttcacctgaattatgcgaacctcacaggtatctggcgact
gcatcttctgatcatactgtcaagatttggaatgtggatggctttaccttggagaaaact
ctgataggacatgaacgctgggtttgggactgtgtattctctgtagatggtgcttttctc
atcacggcatcttctgatacaacagcaagattgtggtccacatctacaggcaaagatatc
aaagtataccaagggcatcataaagcaacagtatgttgtgctctacatgacgggcctgaa
ccttctagctga

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