Solanum dulcamara (climbing nightshade): 129889172
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Entry
129889172 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129889172 isoform X1
KO
K15082
DNA repair protein RAD7
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129889172
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
129889172
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
129889172
NCBI-ProteinID:
XP_055820344
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All DBs
Position
5:complement(43723941..43744178)
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AA seq
980 aa
AA seq
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MDPLDRNKRNGEGINLRDGIGVEPLSMNQRNGMEGMNLSDETWMEPLSGNQRNGNLSGET
WMEPLRRSQRNGEGMNLSDETWMEPLSRNQRNGEGMSWSDIICMEPLTRNQRNGDGMNLS
DETWMEPLSRIQRNGMEGMTLSDETWMEPLGRDQTDGESMSLSDFICVEPLSRNHGVDLS
NEICMEPLSRNQRNGDGMNLSDGIGMKRVPGGVEDDSVVKKIRLGEEFDEIFGSHKYTDE
NVALEKVKDEHLESKSQFMVFEKLDESIGHIGKMDILKRGGVKNGAVGAGEFIVGCQEGG
LLSVPEEESHNAIQMSNWNLGNVNGGSELGFDFNVSVMEAANGSTLVGMLEDTQRIIELN
EIRSDVSDHREERVNKGKAEQIEEIIPYVAFGNCKLELGVMTKDQDICGSSSLGGEKRYT
REQKGKAKVDNTWLSLTTLPMELDLQHSKQQQEAVSTLLQLGSIQHRQSVDVLPMENAEV
NLIAEHATRQKIALRERAPRFARFEAPHEGSSSPETKLPTWETIKDQGNTPDPFSTALKK
IRECIPKRKDEKLVRREASPNPENKEFHCVFPSLLDLSLKTLAENAEAIVSLEGVPDILR
RRLTELLCNSRKMSSHMLDLLIQGSPTQIRIKDCSWLTEEQFCNSFRDFDRRNLMVLQLD
LCGQPTLDHVLGTTIAPASNSLPNLAILSLRGACRMSDRALETLVTSAPSLQSIDLSQCS
LLTHTSIGIAANSLGSILKELCIDDCQSIDAIHILPSLEKMECLELLSVAGIHSVCDQFV
SELLTARGHNIKQLDISRCQNLTDHSLKFIGDTCANLHSLNISNLSKLTDVGLQFLANGC
RSIRKLIFCRNNFSDEGIAAFLEASGACLEELSLNNCSKASTSTAFSLAKSSRKLLHLDL
SWCRRISDDELVLIVDSCLSLKLLKLFGCTQITDVFINGHSNTVVQIIGLSMTQISDKIS
RFDGVEVLLKYSPVVTSSNS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatccattggataggaataaaagaaatggcgagggtataaatttgagagatgggatt
ggggtggagccattgagtatgaatcaaagaaatgggatggagggcatgaatttgagtgat
gagacttggatggagccattgagtgggaatcaaagaaatgggaatttgagtggtgagact
tggatggagccattgagaaggagtcaaagaaatggggagggcatgaatttgagtgatgag
acttggatggagccattgagtaggaatcaaagaaatggggagggtatgagttggagtgat
attatttgtatggagccattgactaggaatcaaagaaatggggatggcatgaatttgagt
gatgagacttggatggagccgttgagtcggattcaaagaaatgggatggagggcatgact
ttgagtgatgagacttggatggagccattgggtagggatcaaacagatggggagagtatg
agtttgagtgatttcatttgtgtggagccattgagtaggaatcatggtgtggatttgagt
aatgagatttgtatggagccattgagtaggaatcaaagaaatggggatggtatgaatttg
agtgatgggattgggatgaagagggttcctgggggagtggaagatgactcagtggttaaa
aaaattaggcttggtgaagaatttgatgaaatatttggttctcacaaatacactgatgag
aatgttgctttagaaaaggttaaggatgagcatctagagagtaaaagccaattcatggtt
tttgaaaaactcgatgaaagtattgggcatataggtaaaatggacattttgaaaagggga
ggggtcaagaatggggcagtgggtgctggagaatttattgttgggtgtcaagaaggtgga
cttttaagtgtaccagaagaagagtctcacaatgctattcaaatgtcaaattggaactta
gggaatgttaatgggggcagtgaattgggttttgattttaatgtttcagttatggaagca
gccaatggaagtactttagttggtatgctggaggatactcagaggattattgaattaaat
gaaattaggtctgatgtgagtgatcacagggaagaaagagtgaacaaaggaaaggcggag
caaattgaggaaataataccttatgtcgccttcggaaattgcaaacttgagttgggagtg
atgaccaaagaccaggatatttgtggaagtagttcattgggcggtgagaagagatacacc
agagaacaaaagggaaaggctaaggttgacaacacttggctgtcacttacaaccttgcca
atggagttggacttgcaacacagcaagcagcagcaggaggctgtttcaacattgctgcag
ctaggatccatccagcatagacaaagtgttgatgtgttaccaatggaaaatgctgaagtt
aatttgattgctgaacatgcaacaagacaaaaaattgcattaagggaaagggctcctcgc
tttgcgcgctttgaagctccccatgaaggctcttctagtccggaaacaaaattgccaact
tgggaaactattaaagatcaagggaacacacccgatcccttttctactgcattgaagaag
attagggagtgtatacctaaacgaaaggatgagaaattggttagacgggaagcttctcca
aatcctgagaataaagagtttcattgtgtgtttccttcgctgctagatctttccttgaaa
acccttgcagaaaatgctgaagcaatagtttctcttgaaggtgtccctgatatcttgagg
cggcgattgactgaattgctctgcaattctaggaaaatgagttctcatatgttggacctt
cttattcaaggatcaccaactcaaattcgtataaaggactgttcatggttaacagaagaa
cagttttgcaactcatttagagactttgatagacgaaacttgatggtgcttcaactagat
ctttgcggacaacccacacttgatcatgtgttgggtacaaccattgctccggcttcaaat
agcttacctaatttagccatcttgtcactgaggggtgcttgtcggatgtctgatagagct
ctggaaacacttgttacatcagctccttctctacagtccattgatttgagtcagtgctcc
cttttgacccacactagtattggtattgcagccaactcattgggatcaattctcaaggag
ctctgtatagatgattgccagagcatagatgcaatacatatattaccttcactggagaag
atggagtgtttggaactgttgtcggtagctggaattcatagtgtatgtgatcagtttgta
agcgagttacttacagcacgtggtcataatataaaacagcttgatatttcccgctgccag
aatctgactgatcattccctgaagtttattggagatacatgtgctaacttgcattcatta
aatatttcaaacttgagtaaattgacagatgtgggactgcagtttctcgcgaatggttgt
cgatcaatccggaaactcatattttgccgtaataatttcagtgatgaagggattgctgca
tttttggaagcttctggagcatgtttggaggaactttcactgaataattgctctaaggct
agcactagcactgccttctcactagccaaaagttcaagaaaattactgcatttggaccta
tcatggtgtcgcagaataagtgacgatgagctagtgctgattgtagacagctgcttgtcg
ctcaagctactcaaactctttggctgtacacagataacagatgtattcataaatggccac
tcaaacactgtagtgcagatcattggattgagtatgactcagatatctgataagattagc
aggtttgacggcgtggaagttctgttgaaatattcaccagtagtgacatcttctaattca
tga
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