KEGG   Solanum dulcamara (climbing nightshade): 129889231
Entry
129889231         CDS       T09577                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 26A isoform X1
  KO
K18466  vacuolar protein sorting-associated protein 26A/B
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04142  Lysosome biogenesis
sdul04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129889231
   04142 Lysosome biogenesis
    129889231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129889231
Membrane trafficking [BR:sdul04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    129889231
SSDB
Motif
Pfam: Vps26
Other DBs
NCBI-GeneID: 129889231
NCBI-ProteinID: XP_055820417
LinkDB
Position
5:complement(55364813..55384735)
AA seq 301 aa
MNYIIGAFKPACNISITFGDGKSRKQVPLKKENGQTVMVPLFQSQENIAGKISVEPVSGK
KVEHNGIKVELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYETY
NGVNVRLRYILKITISRGYAGSIVEYQDFMVRNYSPPPSINNSIKMEVGIEDCLHIEFEY
NKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVETETLAKFELMDGAP
VRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMFRLEET
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaattatataattggtgcgttcaagccagcatgcaacatctcaatcacgttcggtgat
ggaaaatcccgcaaacaggtccccttgaagaaggaaaatggtcaaactgttatggttcca
cttttccaaagccaagaaaacattgctggaaagatttctgtagaaccagtatcaggaaag
aaggttgaacataatgggatcaaagttgagcttcttggtcagatagaaatgtactttgac
agggggaacttttacgacttcacctcccttgtccgagaactggatgttcctggtgaaatt
tatgaaaggaaaacatatccttttgagttttcaactgttgaaatgccctatgaaacatat
aatggggttaatgttcgacttaggtatatccttaaaattactatcagccgtggttatgct
ggcagcatagttgaatatcaagactttatggtgcgcaactatagcccgcctccatcaatc
aacaatagtattaagatggaagtcggtattgaagattgcctccatattgagttcgagtac
aacaaaagcaagtatcacctgaaagatgttatcataggaaaaatttattttctccttgta
agaattaagataaagaacatggatcttgagattagacgccgagaatcaacaggttctggg
gcaaatacccacgttgaaacagagacgctggccaagtttgagttgatggatggtgctcca
gtcagaggtgaatcaatacccattagactcttccttagtccatatgaactgacaccaaca
taccgcaatatcaacaacaaatttagtgtgaaatactatttgaatcttgttcttgttgac
gaagaggaccgtcggtacttcaaacagcaagagatcacaatgtttcgcctggaagaaact
tcctga

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