Solanum dulcamara (climbing nightshade): 129889286
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Entry
129889286 CDS
T09577
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129889286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129889286
Enzymes [BR:
sdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
129889286
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
129889286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
HROB
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
129889286
NCBI-ProteinID:
XP_055820500
LinkDB
All DBs
Position
5:60761253..60779616
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AA seq
789 aa
AA seq
DB search
MVGSESLTPPPPPPPAEAEPPPNKYGVTKPLSLAGPTEADLQRNAALEKFLKESELYESE
EETSRREVVLHQIDQIVKSWVKQLTRQRGYTDQMVEDANAMIFTFGSYRLGVHGPGADID
TLCVGPSYVNRDEDFFIILHDILAEKEEVSELQPVPDAHVPVMKFKFQGISVDLLYASIS
LLVVPEDLDISDQSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRR
GVYSNVTGFLGGVNWALLVARICQFYPNALPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE
LGFLVWDPRKNPKDRTHHMPIITPAYPCMNSSYNVSPSTLRVMMDQFQFGNKICEEIELN
KAQWAALFKHYLFFEVYKNYLQVDIVAADNDDLLAWKGWVESRLRQLTLKIERDTNGMLQ
CHPYPNEFVDLSKPCPHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFKQDVSMYAYWRPG
MDIYVSHVRRKQIPPFVFPDGYKRPRQPRNTSHSTPEKVAKGCMSPEERHPKRKQETETA
HVNMGKAGKRASISPQRIGSVSPLGSSCRSDGSSQIIISDESHRELESSCLMDSSDDRSL
HRLLRSRNDASPSDSSICTPDSLNYTMSRGSTLLGVSREVDLESSNTKSFPSKEVLSPCE
DICTRDVQTFQVLQNDEKGEILGSIHQDNVGQLNEPCIRTGCAESLERLPVSNSNIQNLT
CEGDVSLADRISKLGDGCLSGNGILGNGFAEMSQPNLSLVRAMEPQDGTSSEAVQEAAIR
HVFPRTCVL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttccgagagcttaacgccgccgccgccgccgccgccggcagaggccgagcca
ccgccgaacaagtatggagtcacgaagcctttgtctcttgctgggcccaccgaggcagat
cttcaaagaaatgcagcattagaaaaatttttgaaggaatcagagttgtatgagagcgag
gaagagacatcaaggagagaagtggtgctgcatcagattgatcagattgtaaagtcatgg
gtgaaacaattgactcgccagagaggctacactgatcagatggtggaggatgcaaatgct
atgatattcacttttggttcttatcggttaggagttcatggacctggagctgacatagat
acattgtgtgttggtccctcttatgtcaatcgtgatgaagatttttttatcattctgcat
gatattttggctgaaaaggaagaagttagtgaactccagccagttcctgatgctcatgtc
ccagttatgaaattcaaatttcaaggaatatctgttgatctcctttatgcaagtatttct
ctcttagttgtccctgaagatttagatatctcagatcaatctgtactctacaatgtggat
gaaccaactgttcgaagtctcaatgggtgccgggttgctgatcaaatattgaaactagtt
cctaatgctgagcactttcgcactactcttagatgtctaaagttttgggcaaaaaggcgt
ggcgtttattccaatgttaccggattccttggtggcgtgaattgggctcttttggttgct
cgcatttgccaattttatcctaatgcactccccagtatgcttgtttctaggttcttcaga
gtttatacacaatggcgttggccaaatccagtgatgctatgtccaatagaagaggatgaa
cttggttttcttgtttgggatcctcgcaagaatccaaaagaccgaacccatcatatgcca
attattactcctgcttacccttgcatgaactctagctacaatgtctcgccaagtactctt
cgagtaatgatggaccaatttcagtttggtaacaagatttgtgaggagatagagttgaat
aaagcacagtgggccgcgctttttaagcattatcttttctttgaggtctacaaaaactat
ctgcaggttgatattgtagcagcagataatgatgatttgcttgcttggaaaggctgggtg
gaatcccggcttaggcaactaacactaaagatagagcgggacacgaacgggatgttgcag
tgccatccgtatcctaatgaatttgtagacttatctaagccatgtccacattgtgctttt
tttatgggcttgcagaggaaacagggtgtcaaagtgcaagaaggacaacagtttgatatt
cgtggcacagtcgatgagtttaagcaagacgtaagcatgtacgcttattggagaccaggc
atggatatctatgtatctcatgttcggaggaagcaaattcctccatttgtctttccagat
gggtataagagaccaaggcaacctaggaatacaagtcatagtactcctgagaaagttgct
aaaggctgcatgtctcctgaagaaaggcatccaaagaggaaacaggagactgaaacagct
catgtaaatatgggcaaagcagggaaacgtgcttctatcagtccacagaggatcggatct
gtttctcctctaggtagttcttgtaggtctgatggatcatcacagataatcatttctgat
gagtcacacagggagcttgagagttcttgcctaatggacagttctgatgatagatcatta
cataggctattgcgcagcagaaatgatgcctctccgagtgacagttccatttgtacacct
gatagtttaaactatacaatgtcaaggggttccactttattaggagtttccagagaagtt
gatttagagagttctaacacaaaatccttcccaagcaaggaggtgctcagtccatgtgaa
gacatatgcactagagacgtccagacttttcaagtcttgcagaatgatgagaagggggag
attttgggatcaattcatcaggataatgttgggcagctcaatgaaccatgcattcggact
ggttgcgcagaaagtctcgaaagactgcctgtatcaaattccaacattcagaacctcact
tgcgagggtgatgtaagcttggccgatcggatttcaaaactaggggatggatgtcttagt
gggaatggaatattgggtaatggctttgccgagatgtcacagccaaacctctctctcgta
agggcaatggaaccccaggatgggacaagctcagaggctgtgcaggaggctgcaataagg
catgtgtttccgaggacctgtgttttatga
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