Solanum dulcamara (climbing nightshade): 129889303
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Entry
129889303 CDS
T09577
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129889303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129889303
03036 Chromosome and associated proteins [BR:
sdul03036
]
129889303
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129889303
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129889303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
129889303
NCBI-ProteinID:
XP_055820528
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All DBs
Position
5:complement(62592481..62611907)
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AA seq
719 aa
AA seq
DB search
MPGMTSESDDLAMVPVSPESENQPVVIYPLRHGLKSPIHRLSFSWACGNTLRVSVFQKPQ
SETADGDSEAGGRVVELKLSNSADEEVDAARWRRMAYSSVTPFALLQSRKHSFSAASRMS
LDTPPYKAEWWEHVIEYSKEISSLLSDRKTPPKSIIEDPKSVVNEIAAPMCLKAAWELLE
IFYVDKQSQSWIPERLLDWLADYNSLFSGSLPTIHSKLVDFQQELVGLQVVEEDPNYWDA
MSSALAVGWLETVVKLLRLHGSYRFDQLSSRETENGLVEAVAVLISKMPRMRSSLREDNL
GECYKTKPDFLKAWEKWRTQISKLDCSSYWLECDHRQTKEGLKNLIQIMLGNPTVLSNAT
FNWMELFISHFLYIRPFTAGLESMHNSAQKCMQVKPVSSPHKLFGLLIGILGENTEVVLA
ECSRSFGPWMMVHAVELLTGGSTHAEILLHEEHSKLGGVSIEELHRLVYAQVLSSHALTW
QIAPIYLTSCIKQGIGLLENLLYKQPVQHSQILLKSIEICRLYELDTISSNIMRIAGVYH
WKHGRKGSGVFWLQQARDEFRLNRIAKQLFDFVGKSVSDEGFKQWEGLIELLGSESRTVG
GLEFLNKYRAFRRSLLQVHGDTPADAARNAAEALVSLMKNPSTPQRFWLPLLYDSLKLLM
WQTRPLLNVSQTQLLLNKLQELSMARLRPDFIEADLPSDALSSVRLALATNLGRAILEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccagggatgacatcagaatccgatgacctagcaatggttccagtttcgccggagtcg
gaaaatcaaccggtggtcatctaccctctccgtcacggcctcaaatccccaattcatcga
ctctccttttcatgggcgtgtggcaatactctccgagtctcagttttccagaagcctcag
tcggagacggcggacggagacagcgaggctggcggaagagtggtggaactcaagcttagt
aacagtgctgatgaggaagttgatgctgcaagatggaggagaatggcctacagttcagtg
actcctttcgctcttcttcagagccggaaacattctttttctgcagcatccagaatgtcg
ttggatactcctccttacaaggcagagtggtgggagcatgtcatagagtacagcaaagag
ataagttctcttctcagtgatcgaaaaacgcctcctaaatcaattatcgaagatcccaag
tcggtagtaaatgaaattgcagcgccaatgtgtctgaaagctgcgtgggagctattggag
atattttacgtagacaagcaatctcaatcttggattcctgaacggttgctagattggtta
gctgactacaattccttattctcgggatctctaccaactattcactcaaagcttgtggat
tttcagcaggaacttgttggactacaggttgttgaagaagatcctaactactgggatgca
atgtcatcggcattggccgttggctggctggaaactgtggtaaaattgttgcgcttgcat
ggctcttaccggtttgatcaattatctagtcgagagacagagaatggactggtcgaagca
gttgctgttcttatatccaagatgcctagaatgcgttctagtctgagagaagacaatttg
ggcgagtgttataaaaccaagcctgacttcctgaaggcttgggagaagtggaggacacaa
ataagtaaactggactgcagttcctactggcttgaatgtgatcaccggcagactaaagaa
gggctgaaaaatttgatccagatcatgttgggaaatcctactgttctatcaaatgcaact
ttcaactggatggagctttttatatcccatttcttatacattaggccatttactgcgggt
cttgagagcatgcacaattcagctcagaagtgcatgcaagtaaagccagtttccagcccc
cataagctgtttggtcttttaattggaattcttggagaaaatactgaggttgttctagca
gagtgctcaagatcatttggcccctggatgatggtgcatgctgtagagttgttgacaggt
gggagcactcatgcagaaattcttttacatgaagagcattccaaactgggtggagttagc
atagaagagctgcatagacttgtatatgcacaagttctgtcttctcatgcattaacatgg
caaattgcaccaatatacttgacttcatgcataaaacaagggattggattattggagaat
ttgctgtacaagcagcctgtacagcatagccaaattctgttaaagagtatagagatctgc
cgcctgtatgaacttgacaccataagttcaaacattatgaggattgctggtgtgtatcac
tggaaacatgggagaaaagggtctggtgtcttctggctgcagcaagctcgagatgaattt
cgtttaaacagaattgccaagcaattatttgatttcgtggggaagtctgtttctgatgaa
ggattcaagcaatgggaaggtctcatagagttgctgggttctgagtctagaactgttggc
gggcttgagtttctgaacaagtacagggcctttaggagatccctactgcaggttcatggt
gatacacccgctgatgctgctcgtaatgcagctgaagctctcgtctctctcatgaaaaat
ccttctacgccgcaacgcttttggttacctcttctatatgattcattgaaattgttaatg
tggcagacgcgaccattgcttaatgtttctcaaactcagcttctcttgaataaactgcaa
gagttgtccatggcaagattgaggccagactttattgaagctgacttgccatctgatgcc
ttaagctctgtcaggctggcacttgccactaacctgggtcgtgcaatcctcgaagagtaa
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