Solanum dulcamara (climbing nightshade): 129889378
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Entry
129889378 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129889378
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129889378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129889378
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
129889378
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
90S particles
Other 90S particles
129889378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
129889378
NCBI-ProteinID:
XP_055820629
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All DBs
Position
5:65696116..65701651
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AA seq
277 aa
AA seq
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MVRAYKVKGEKRKKKGENYDKEEEIEEPLEEESTKRVKTEHTEADTEAAERVVDLLAGIP
VVATDQTTKPGVIFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNGRNPSDYRPDIAHQA
MLSILDSRVNKAGRLKALYVRTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVG
KREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQDYVNGVNNDLNLVFVVGAMAHGK
IDKDYVEDYLSISDYPLSAAYCISMITNAVERKWKIL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcatacaaagtaaaaggggagaagagaaaaaagaaaggagagaattacgac
aaagaagaagaaattgaggaacctttggaagaggaatcaacaaaaagagtgaagacagaa
cacactgaggcagacaccgaggcagctgaaagagttgtagatttactagctggcattcct
gttgttgcaactgatcaaaccactaaacctggtgttatttttatcattgaaagagcttct
cttgaaattgctaaaattggaaagacttaccaacttctgaactcggatgaacactccaac
tttctgaagaagaatggtcggaacccttctgattatcggcctgatattgcgcatcaggca
atgctttcaattttagatagccgagtaaataaagctgggcgattaaaagctttgtatgtg
aggactgagaaaggtgtcctttttgaagtaaaacctcatgttcgtatccctagaacattt
aagagatttgctggcatcatgttgcagctgctacaaaagctgagcataactgctgttggt
aagcgagagaaactgttgcgtgttataaaaaaccctgttacacagtacctacccatcgac
tgtcggaagataggcttctctcatagttctgagaagctggtggatattcaggactatgtt
aatggcgtcaacaatgacttgaaccttgtttttgtggttggagctatggcccatgggaaa
attgataaagattatgtcgaagattatttatcgatttcagattatccattgagtgctgca
tactgcatatcaatgatcacgaatgctgtggagcggaaatggaagattttgtag
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